Gene Patl_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4287 
Symbol 
ID4176077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5158750 
End bp5159484 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID638057324 
ProductSapC 
Protein accessionYP_663840 
Protein GI109900585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACC ATGTATTACT CAACAGCGTT GAACACAGCG ACCTAAAAAT TATCACCACC 
CGGAGCGAGA AATATGGTGA TAATCTTTGG TTTTCGCCCA CCTTTGTTGA CGAGATACGC 
AGTGTACAAG CGCATTACCC TATCGTATTT CACAAAGACC AAAACAGTGG CCAGTTCACA 
CCGGTCGCTC TTTTTGGTTT TGAGCAGCAA GAAAATCTAT TTTTAGAATC CTCAAAATGG 
TGTGCAACCT ACATCCCCTT GTCTGTTCAA CGCATGCCTT TCTTCATTGG TAGACAAGAT 
GTGACGACCG ATGGCGGAAC TGAGCAGCAA CGTGTGATTA CCTTAGATAT TGATTCTCCA 
CGCGTTAGTA AAACGCAGGG TATCGAGTTG TTTTTAGAAT ACGGTGGAAA TAGTCAATAC 
TTAGAAGACA TAGCCGCCAT ACTTGAAACC TTGCATCATG GCCTGCAAGG CAATGACAAC 
TTTGTAAATG CGCTAACAAG CCTCAATTTA TTGGAGCCCA TGACACTTGA TATCACCTTA 
GATAATGGCG CTAATCATCA ATTAGTGGGT TTCTATACCA TTAATGAAGA CGCACTCAAT 
TCCCTTAGTT CAGACAACAT AGTGCAGTTA CATAAAGCTG GGTATTTGCA AGCTGCTTAT 
CTGATTTTAG CCTCGCAAGT GCATTTCAAT GATTTAGTGG CCTTGAAAAA CAAGCGGGTC 
GCACAAGAGG AATAA
 
Protein sequence
MANHVLLNSV EHSDLKIITT RSEKYGDNLW FSPTFVDEIR SVQAHYPIVF HKDQNSGQFT 
PVALFGFEQQ ENLFLESSKW CATYIPLSVQ RMPFFIGRQD VTTDGGTEQQ RVITLDIDSP 
RVSKTQGIEL FLEYGGNSQY LEDIAAILET LHHGLQGNDN FVNALTSLNL LEPMTLDITL 
DNGANHQLVG FYTINEDALN SLSSDNIVQL HKAGYLQAAY LILASQVHFN DLVALKNKRV 
AQEE