Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4285 |
Symbol | |
ID | 4176075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 5154012 |
End bp | 5155178 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638057322 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_663838 |
Protein GI | 109900583 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00317648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAAAAA CTATCCCGGT GAGCGATTTA GAAGTCGGCA TGTATGTAGA CTCAATTGCA GAGCAAAATG GCAACCTGAA AATCAAAAGC AGAGGACGGG TGACAACAAA TACGGCGATC ACTGCCATGA AGAAGCAGGG TATTGTTTCG ATTGTCATTG ATTTGAGTAA GCAACTGGTA AAGGAGGAAG AGCCCGCCCC TGATGTGGAA CCACCTTCAG AGCTAGATAT TCCGTTTGCT GACGAAATAG GTAAGGCGGC AAAGCTTCAC GAGAAAGGTA AAATACTGCA ACGGCGAATG CTACAGGCGG CTGACAAGGG CTTGCCTATA GATATAGCCA TTCCAAAAGA GTTTACCTCT AATTTGGTGT CTTCTATTGA CCGTAATCCA AATGCCCTTT TGTGCATGAC TAAAATTCGT GAAAAAGACA GTTACCTGCT TGAGCATTCC TTAAACGTCG CTATCTTGCT AGCCAACTTT GCCAATTACT TAGAAATGCC AGAAGAAGAA GTGCAAGAAC TCGCGTTGTC AGGTTTCCTG CATGATATAG GAAAAATCAA AGTCCCCGAT GAGATCCTAC ATAAGCCGGG TCGTTTGACT GACCAAGAAA TGGTGATTAT GCGTGATCAC GTATATTACG GTATCCGAGT GTTAGAAGAG ATGGGTATAC CAGAGCGTAT GATTGAAACT ATTTCACAAC ACCATGAGCG ACTCGACGGT TATGGTTACC CAGATGGTGC CCGGGGAGAT GAAATAACCA AATTTGGTCG TATGATAGCC ATAGTGGATA CCTACGATGC TATCACCGCA GATCGTTGCT ATAAAGCGGG AATGCCTTCG CAAAAAGCAC TGAAAATACT CCATGAAGAA ACACCGTTAA AGTATGATCA ACACTTAGTC GAGCAGTTCA TAAAATGTAT TGGTGTGTAT CCAGTGGGAA GTTTAGTGAA ACTCTCTAGC GAGAAAATAG CTGTTGTGAT TAAGCAAAAT GAGAATAACC CCCTTAAACC ACAGGTGAAG GTTTTTTATT CAGTGCGCAG CGCTCACTAT TTGCCACCCG TGGAGATTGA CTTACTTCAC TCTCAGTATC GCGTTGAGAA GGCGGTGCTG GCCAGTGAAT TCAAATTAGA CTTCAATCGT TACTTCAACG AATCTATCGC CATTTAG
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Protein sequence | MLKTIPVSDL EVGMYVDSIA EQNGNLKIKS RGRVTTNTAI TAMKKQGIVS IVIDLSKQLV KEEEPAPDVE PPSELDIPFA DEIGKAAKLH EKGKILQRRM LQAADKGLPI DIAIPKEFTS NLVSSIDRNP NALLCMTKIR EKDSYLLEHS LNVAILLANF ANYLEMPEEE VQELALSGFL HDIGKIKVPD EILHKPGRLT DQEMVIMRDH VYYGIRVLEE MGIPERMIET ISQHHERLDG YGYPDGARGD EITKFGRMIA IVDTYDAITA DRCYKAGMPS QKALKILHEE TPLKYDQHLV EQFIKCIGVY PVGSLVKLSS EKIAVVIKQN ENNPLKPQVK VFYSVRSAHY LPPVEIDLLH SQYRVEKAVL ASEFKLDFNR YFNESIAI
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