Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4277 |
Symbol | |
ID | 4176067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 5147213 |
End bp | 5148508 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638057314 |
Product | amidohydrolase |
Protein accession | YP_663830 |
Protein GI | 109900575 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTTT CAATGATCAG CGTTGCCTTA GCCGCTTCGC TGATATGCAC CCAAGCCCTA GCGGCCACCT ATATACAAGC AGGCAAGCTT ATCCCCGCCA ATTCAGACAG GGTAATGAGT GAAGTGACCG TAGTGGTCGA TGGCAATAAG ATCAGCAAAA TCCATCAAGG CTATATTTCC GGCGGCGAAC AAGATGAACT GGTCGATCTT AAAACGCACA CCCTTATGCC TGGCTTGATG GATATGCACA CCCACGTTAC CTCGCAACAC AATGGTCCAT CGAGTTACAT GGAGCGATTT ACCCTAAATG AAGCCGACTA TGCCATAAAA GGCGTTCAGT ACGCCAAGCG TACACTTCTG GCGGGTTTCA CCACTATTCG CAACTTAGGC GATGGTTATA ACGAGTCGGT AGCCCTACGC AATGCGATCA ACAAAGGTGT CGTGGAAGGC CCACGTATTT TTACAGCGGC AAAATCAATT GCCACAACGG GTGGGCATGC TGACCCGACC AACGGTACAG CAAAGAAAAT TCAAGGTGAC CCAGGCGCCG CTGACGGCGT AATTAATGGC GTAGCAGAGG CACGTAAAGC CGTTCGTCAA CGCTATAAAG ACGGCGCAGA CTTAATCAAA ATCACGGCCA CTGGCGGGGT TTTATCTGTC GCTAAAAGTG GTCAGAATCC GCAGTTTATG GACGATGAAT TAAAGGCTAT TGTTGATACT GCTAAAGATT ATGGTATGAC AATCGCCGTT CATGCGCACG GTAAAGAAGG CATGGAGCGC GCGATTGAAG CAGGTGTGAC ATCCATCGAG CATGGCACCT ACATGGACAA ACAAACCTTT AAACTGATGA AAAAGCATCA GACTTACTAT GTTCCTACAG TGATGGCTGG TAATTGGGTA GCTGAGAAGG CCAAAATTGA TGGTTTCTTT CCAGAGTTAG TACGCCCCAA AGCCGCGACT ATAGGGCCTC TGATTCTACA AACGTTGGCT AATGCACATA AAGCCGGGGT TAAAATTGCG TTTGGTACGG ATTCAGGTGT ATCCGCTCAC GGTGATAATG GCTTAGAGTT TGTGCTTATG GTCGAAGCAG GCATGAAACC CATAGAGGCT ATTCGAGCTG CAACCTATCA TGGCGCAATA TTAATCGACC AACTCGATTA TTTAGGCACC ATAGAAGATG GCAAGTTAGC AGATTTAGTC GCGGTATCAG GTGACCCGCT AGACGATATC AAAAGGATGC AGCAGATCAG CTTTGTGATG AAAAACGGCC AGATATATAA AACACCTGAA GCATAG
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Protein sequence | MRVSMISVAL AASLICTQAL AATYIQAGKL IPANSDRVMS EVTVVVDGNK ISKIHQGYIS GGEQDELVDL KTHTLMPGLM DMHTHVTSQH NGPSSYMERF TLNEADYAIK GVQYAKRTLL AGFTTIRNLG DGYNESVALR NAINKGVVEG PRIFTAAKSI ATTGGHADPT NGTAKKIQGD PGAADGVING VAEARKAVRQ RYKDGADLIK ITATGGVLSV AKSGQNPQFM DDELKAIVDT AKDYGMTIAV HAHGKEGMER AIEAGVTSIE HGTYMDKQTF KLMKKHQTYY VPTVMAGNWV AEKAKIDGFF PELVRPKAAT IGPLILQTLA NAHKAGVKIA FGTDSGVSAH GDNGLEFVLM VEAGMKPIEA IRAATYHGAI LIDQLDYLGT IEDGKLADLV AVSGDPLDDI KRMQQISFVM KNGQIYKTPE A
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