Gene Patl_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4211 
Symbol 
ID4176000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp5072584 
End bp5074218 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content45% 
IMG OID638057247 
Product2-polyprenylphenol 6-hydroxylase 
Protein accessionYP_663764 
Protein GI109900509 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.869806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGATCC TTCGTTTATA CCAAATCAAT AAAGTTTTTT TACAACACGG CTTAGATGAA 
CTTATTCCTG ACAAGTGGCT GCCTTGGTAC GCTAAATTAG GACGCTTCGG CTTTTTCTGG
TTGCGTAACA AGCATAAAGA TAAATCCCCC GGTGCCCGTA TTCGTTTAGC GTTGCAGTCT
TTAGGGCCAG TATTTATTAA ATTTGGCCAA ATGTTGTCTA CCCGTAAAGA CTTGCTAAGC
CAAGACATTG CTAACGAATT GGCCATCCTG CAAGACCAGG TCGAGCCTTT TGACAGCGAG
GTAGCTCAGC GAATTATTCG TCATGCGCTT GGCGTCAGCG ACCTAAGCGA AGTCTTCAGT
GAATTTGAAG AAACACCTTT AGCGTCAGCA TCCATCGCCC AAGTGCATGC AGCCAAACTG
ATTGGTCATA GCGAAGAAGT CGTCGTTAAA GTGATTCGCC CAAATATAGG CTCCGCGATC
CATGCTGATA TTCAGCTTAT GCGCACTTTT GCTAATGCAT TACAAAAATT ACTGCCAGAT
GGTAAACGCT TACGCCCGGT TGAAGTTGTC GCAGAATACG AAAAAACGAT CATTGGCGAG
TTGGACTTAC TTAACGAAGC CGCCAATGGC ATTCAATTTA AACGTAATTT TGAAGATTCT
ACCGCGTTAT ACGTGCCACA TATTTACAGT GATTACTGCC ATGCAAATGT GATGGTAATG
GAACGTATTT ATGGCACTCC CATTTCTGAT GTTGCCACGT TAGAAGCCCG TGGCACCAAT
ATGAAAAAGC TTGCCGAACG CGGGGTAGAG GTATTTTTCA CCCAGGTGTT CAGAGACAGC
TTTTTCCATG CTGACATGCA CCCCGGCAAT ATATTTGTCG CCTTGGATAA CCCTGACGAC
CCACAATATA TCACCATAGA TTACGGTATT GTCGGCACGC TCAATAGCGA AGATAAACGC
TACTTAGCGG AAAATTTTAT CGCTTTCTTC AATCGCAATT ACCGTAAAGT AGCTGAGCTA
CACGTTGATT CAGGTTGGGT GCCAAGCACC ACCAGCATTG ATGAATTTGA AGCGTCGATT
CGCCGCGTAT GCGAGCCCAT TTTCCAAAAG CCTCTGGCTG AAATTGAATT CAGTAATGTG
CTACTGCAGT TATTTAATAC CGCTAGACGC TTCAATATGA TTATTCAGCC GCAATTGGTG
CTGCTGCAAA AAACCCTGTT GTATATAGAG GGTTTAGGCC GCCAGTTGTA CCCGCAATTA
GATTTATGGC AAACCGCCAA ACCCTTCTTA GAAAATTGGA TGCGTGAACA AATTGGCGTA
AAAGCCATGT ATAACAAGGT TTCAGCGAAT TTACCGTTCT GGTCTGAAAA GTTGCCAGAA
ATTCCCGATT TAGTGTATGA CTCTATGCGC CAAATCAAAC GCTATCCCGA GCAACAAAAG
TTGCAGTTCG AAAAGCAGCA GTGGCAGGTG AAACAGCAAC AGCGTAGATT AGTATTTACT
ATTATTGGAG CAACGTTGTT GGTAGTGTCC AGTGTGATGC CTGTTTACAT TCAGCATTGG
TGGATACCGG CGAGTATCGC TACATTTGGC GTTTTTAGCT GGTTAATTGC GTGGCGCTGC
AGAGTGCCAG AGTAG
 
Protein sequence
MRILRLYQIN KVFLQHGLDE LIPDKWLPWY AKLGRFGFFW LRNKHKDKSP GARIRLALQS 
LGPVFIKFGQ MLSTRKDLLS QDIANELAIL QDQVEPFDSE VAQRIIRHAL GVSDLSEVFS
EFEETPLASA SIAQVHAAKL IGHSEEVVVK VIRPNIGSAI HADIQLMRTF ANALQKLLPD
GKRLRPVEVV AEYEKTIIGE LDLLNEAANG IQFKRNFEDS TALYVPHIYS DYCHANVMVM
ERIYGTPISD VATLEARGTN MKKLAERGVE VFFTQVFRDS FFHADMHPGN IFVALDNPDD
PQYITIDYGI VGTLNSEDKR YLAENFIAFF NRNYRKVAEL HVDSGWVPST TSIDEFEASI
RRVCEPIFQK PLAEIEFSNV LLQLFNTARR FNMIIQPQLV LLQKTLLYIE GLGRQLYPQL
DLWQTAKPFL ENWMREQIGV KAMYNKVSAN LPFWSEKLPE IPDLVYDSMR QIKRYPEQQK
LQFEKQQWQV KQQQRRLVFT IIGATLLVVS SVMPVYIQHW WIPASIATFG VFSWLIAWRC
RVPE