| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4176 |
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| Symbol | |
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| ID | 4175965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5027603 |
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| End bp | 5028676 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057212 |
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| Product | peptidase U61, LD-carboxypeptidase A |
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| Protein accession | YP_663729 |
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| Protein GI | 109900474 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATAG TCCGACGAAC GTTACTCAAA GCCTTTATTA CTTCTGCGAT GGCGAGCGCG
TTGATTCCGC TTACATCAGT AAGTGCCGCA TCTGTGGCTG ATGCTGGTGA GCGCTCAGTA
AAAATTCGTA AACCCAAGCG CTTAAAGGCA GGCCAGACCA TTGGGCTCAT TGCTCCAAGC
AGCAATACTT GGGAAGACCA AGAAATCTAC TTCGCCATGG ATATTATTCG CTCTTTTGGT
TTCAAGGTGA AAACGGCCAC TCATTTGTTT GATCGCACCG CTTATTTAGC GGGTACCGAT
AAAGACAGAG CGAACGACGT AAATAGCATG TTTGCTGATA ATACCGTAGA CGCTATTTTT
TGCTTACGTG GTGGCTATGG CTCGCCACGA ATTTTGCCTT ATTTAGATTA TGACCTCATC
CGCCAAAACC CCAAGGTGTT TCTCGGTTAT AGCGATGTCA CTGCGCTGCT TAATGCGATT
TACACTCGAA GCGGCATCAT GACCTTTCAC GGACCTATTG CGAAACAGAG CTTTACTGAG
TACACCTTAG GTGAATTCAA AAGCGTGTTG TTCAATCCTG TGAAGAGTAT GCCACTGGCC
ACACCGCCGG TGTTTGAACC CGCCGAAGGT CAAGCCGAGA AAGACAACCG TCTTACAACC
GTTACCGAGG GGCAGGCATC GGGCGTATTA ATTGGTGGCA ATCTGTCGCT TATGGTGAAG
TTAGTGGGTA GCCCTTATGA GCCAGATTAC GCAGGCAAAA TCCTATTCTT AGAAGACGTA
GAGGAAGCGC CCTACCGGAT CGACGGTATG CTAACCCACC TTAAACTGGC AGGTAGATTG
GACAAGGTAG TAGGTATAGT GTTTGGTAAA TGTACCGATT GTCAGCCGAG CAGCGGCCCG
TCCTTTAGCG TTGAACATGT TCTAAAGGAC CGTTTAGGTG ACTTGAATGT GCCCGTCCTA
AGTGGTGTGA TGATTGGTCA CATTAAAGAT ATGGCGACCG TACCTGTTGG CGCTATGGCA
ACACTTGATG CAAGCAAGCA ACAATTAACG CTAGATGAAA GCGCGGTGCT TTAA
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| Protein sequence | MMIVRRTLLK AFITSAMASA LIPLTSVSAA SVADAGERSV KIRKPKRLKA GQTIGLIAPS
SNTWEDQEIY FAMDIIRSFG FKVKTATHLF DRTAYLAGTD KDRANDVNSM FADNTVDAIF
CLRGGYGSPR ILPYLDYDLI RQNPKVFLGY SDVTALLNAI YTRSGIMTFH GPIAKQSFTE
YTLGEFKSVL FNPVKSMPLA TPPVFEPAEG QAEKDNRLTT VTEGQASGVL IGGNLSLMVK
LVGSPYEPDY AGKILFLEDV EEAPYRIDGM LTHLKLAGRL DKVVGIVFGK CTDCQPSSGP
SFSVEHVLKD RLGDLNVPVL SGVMIGHIKD MATVPVGAMA TLDASKQQLT LDESAVL
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