| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4159 |
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| Symbol | |
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| ID | 4175948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5001319 |
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| End bp | 5002953 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057195 |
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| Product | beta-lactamase |
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| Protein accession | YP_663712 |
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| Protein GI | 109900457 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0453527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTCA GCGGTCGCAA CAGCATTAAT CTCATTATCT CATGTTTGTG TTTGGGGAGC
GTGATATGGG CAACGACGAC AGGAGCACAA GTGAAGCAAA ATGAGCGTCA TCAGCCGATC
GTAAACACAT CAAAAATAGA CATGCAGATC AGCAAAATCA TGGAGAGGTT ACATATTCCA
GGTGTGGCGG TTGGCGTGAT CAAAAACGGT AACGTGGTGC TCGAGCAAAG CTACGGTGTG
AAGAATATTC ACAGCAATGA GCCTGTGGAT GCACAAAGCC TATTTAAAAT TGCTTCAAAT
ACCAAAGCCT TTACCGCGGC CGCGCTAGCG ATATTGGTTG ATGAGGGCAA ACTAAGCTGG
GATGACCCAG TGGTAAAGCA TCTGCCTGAC TTTCAGTTAC ATGACCCTTG GATAAGCGCC
CATTTTAGCA TTACGGATTT GCTGACCCAT CGAAGCGGCT TAGGCCTAGG GGCAGGAGAT
TTAATGCTGT GGCCAGAGCC TTCCAGTTTT AGCCGCCAAG AAGTGGTGCA TAATCTGCGT
TTTCTAAAAC CCACAGGGCA GTTTCGCGCT GACTACGCCT ATGACAACTT GCTGTATATC
GTCGCAGGTG AAGTGGTCGC TGCAGCAAGT GGCCAGCCTT GGGAGCAATT TATTGAAAAA
CGTATTTTTG CGCCCCTAGG CATGCAGCAT TGCTACGCGG GTCATGTTCC TCAAGCGCAG
CAAGCATTGG CGGCAACCCC GCATGGCATG GTGGATAATA AACTAGCGAC CATAGTGCGT
GATGTTGATA CCAGTAAACC GAATGTATCA GGCGCCGCTG GTGGTATTCA ATGCAGTCTA
GAAGACATGC TGATTTGGGC TCAAGTGCAG CTCAATCAAG GTAAAACAGC AGATGGAAAA
CAACTGTTTT CAACCACCCA GCACCAACAG ATGTGGTCGC CAAAAACGAT CATGCCGGTT
TCAAGTACGG ATAAGCGCCA TAACCATAGT CACTTTAGTG CCTACGGCTT AGGTTGGCGC
TTAAATGACG TAGACGGGAA GTTGCGAGTG CATCACAGTG GCAGCCTGGC GGGTATGTAT
TCCTACGTAA GTTTCTTTCC AGAACTTGAT TTGGGCATAG TGGTGCTGAC GAACCAGCAA
TCCAGTGCGG GGCGAAGTGC ACTCATGTAT ACCTTAATGA AACCCTATTT AGGCGACAAC
GAAACAGATT GGCTAAAAGT GTTTGCCCCC AAGTTATCGC CGTCAAACAA CAAGGCAGTA
AGTAACTATA TGGCGAATAA CAAAACCGCT CAAAAAGCAC AGCAACTTGT TGCCGTGACT
GCCGGCTCCC TAAATGCAGC GTTAGGTGCT TATCGTGATG ATTGGCTTGG GGATTTCTTT
TTAGAGCAAA AAAACGGCCG TATTCAGTTA CGCTCAAAAA GAGTGGTAAA GCTTGTGGGT
GGGTTATACA AAGGTGATGA AAATGACCAT TTTTTGGTGC GCTGGGATGA CAGAAGCCTA
GAGGCAGATG TGTACGCCAA GCTCTACCGT GACCAAAACA ATGCCATAAC CTTTATGAAG
CTTATTCCTG TGCATGCTAA TATTGATTTT AGCTATGATT TTCAAGATCT TACTCTGTAT
AAAATGATTG AGTAA
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| Protein sequence | MIFSGRNSIN LIISCLCLGS VIWATTTGAQ VKQNERHQPI VNTSKIDMQI SKIMERLHIP
GVAVGVIKNG NVVLEQSYGV KNIHSNEPVD AQSLFKIASN TKAFTAAALA ILVDEGKLSW
DDPVVKHLPD FQLHDPWISA HFSITDLLTH RSGLGLGAGD LMLWPEPSSF SRQEVVHNLR
FLKPTGQFRA DYAYDNLLYI VAGEVVAAAS GQPWEQFIEK RIFAPLGMQH CYAGHVPQAQ
QALAATPHGM VDNKLATIVR DVDTSKPNVS GAAGGIQCSL EDMLIWAQVQ LNQGKTADGK
QLFSTTQHQQ MWSPKTIMPV SSTDKRHNHS HFSAYGLGWR LNDVDGKLRV HHSGSLAGMY
SYVSFFPELD LGIVVLTNQQ SSAGRSALMY TLMKPYLGDN ETDWLKVFAP KLSPSNNKAV
SNYMANNKTA QKAQQLVAVT AGSLNAALGA YRDDWLGDFF LEQKNGRIQL RSKRVVKLVG
GLYKGDENDH FLVRWDDRSL EADVYAKLYR DQNNAITFMK LIPVHANIDF SYDFQDLTLY
KMIE
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