| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4156 |
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| Symbol | |
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| ID | 4175945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4996663 |
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| End bp | 4997994 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057192 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_663709 |
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| Protein GI | 109900454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTCAAA TATTATTGGT CGATGATGAT AAGGAATTTA CCGACGTAGC GAGTAATATT
ATCGAGTTTT TAGGCCATGA CGTCGAAATA GCTAACAATT TAGAAGAAGC TTACAACTGT
ATCGAGTTTC AGCGCTTCGA CCATATATTG CTCGACTTCA TGTTACCAGA CGGTAGTGCG
TTGCATTTAA TAGACAAATT AAATACTCAG GACAAAGTCC CATTTGTGAC CTTGATCACT
GGACACCCAT CGGTGAAAAG CATCATTTCC GGCATGTGCG GGCCTAACGT TAACTATCTT
GTTAAACCGT TACAGCGTGA AGATTTGGAA CTGGTGTTAT CGGGCAAAAC CAAAGCTGTG
AAAAAAGCCA AATCATCTTC TATCACTAGG CACTTTGGTT GTTTGGTGGG CGAGTCTGCT
CCTATGCAAG AACTCTATGA AATGATTGAG CGGGTGGGTA AAACCAATGC CAATGTCATG
CTAATGGGCG AAAGTGGTGT CGGTAAAGAA GTCGTCGCCC ACGCTATTCA TACTGCAAGT
GACATTGAGG GGCCCCTTGT GGCAACCAAC TGTGGCGCAC TATCCCGAGA GCTCATTGGT
AGCGAGCTAT TTGGTCATGA GAAAGGTTCA TTCACTGGCG CCGTAGGGCG TAAAATTGGT
GTATTTGAAC AAGCTCAACA AGGTACTTTG TTTCTTGATG AGATAACGGA AATGCCATTA
GAAATGCAAC CTAACTTGCT GCGCGTGTTA GAAAGTAAAC GCGTTACCCG AGTCGGCGCG
GTAAAAGACA CGCCAGTTGA TTGCCGGGTG ATTTCAGCCA CCAACCGCAC AGTTGAAGAA
ATTGCCCAAA GCAAGGTGTT GCGCGAAGAC ATTTACTTCC GCTTAGCTGT ATTCCCCATC
ACGATCCCGC CACTGCGTGA ACGTCTGGCG GATATTCCAC TCTTGGCCAC TGCTTTTATC
GAGCAATTAA ATGCAGAAAA TGACACAAAT TTTGCGTGGC AGAATGCACA GTTGGATCAA
TTAAAAGCGT ATGGCTGGCC AGGTAACATT CGTGAATTAC GCCACGCTAT CCACAGAGCA
TTCATCATGA GTGACCCTAC GGGTACAGAA GTCACTTTGC CTAAAAACTT TGAGTCCCCG
TTTGCTAAAA ACCAAACGTC GACCAATCAG GTTACCGCTG GGCAAACGAT TGATGATGTT
GAAAAAGAAC TGATCCGGGT GACATTGGAA AAGGTAGAAG GCAACAAAAC CCTAGCCGCT
GAAATGCTTG GCATCAGCAC CAAGACTTTA TATAACCGTT TAAATGCTTG GGAAAACCAA
GCTCAGGGAT AA
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| Protein sequence | MSQILLVDDD KEFTDVASNI IEFLGHDVEI ANNLEEAYNC IEFQRFDHIL LDFMLPDGSA
LHLIDKLNTQ DKVPFVTLIT GHPSVKSIIS GMCGPNVNYL VKPLQREDLE LVLSGKTKAV
KKAKSSSITR HFGCLVGESA PMQELYEMIE RVGKTNANVM LMGESGVGKE VVAHAIHTAS
DIEGPLVATN CGALSRELIG SELFGHEKGS FTGAVGRKIG VFEQAQQGTL FLDEITEMPL
EMQPNLLRVL ESKRVTRVGA VKDTPVDCRV ISATNRTVEE IAQSKVLRED IYFRLAVFPI
TIPPLRERLA DIPLLATAFI EQLNAENDTN FAWQNAQLDQ LKAYGWPGNI RELRHAIHRA
FIMSDPTGTE VTLPKNFESP FAKNQTSTNQ VTAGQTIDDV EKELIRVTLE KVEGNKTLAA
EMLGISTKTL YNRLNAWENQ AQG
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