| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4076 |
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| Symbol | |
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| ID | 4175865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4900127 |
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| End bp | 4901023 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057112 |
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| Product | phage integrase |
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| Protein accession | YP_663629 |
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| Protein GI | 109900374 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC AGCCAAGTCT GCAACCCTTA CTCGGCAAGT ACTTTGATTA TCTTAAGTAC
GAACGTAATC TGGCCGCTAA ATCCATTGAA AATTATCAGC GTCAACTCGC CAGCATCTGC
CAAGCCCTCA CCATTACCGC ATGGCCAGAG CTAACGGTCG ATCATGTGCG CCAAGTGCTG
AATCAGGCTC GTCGTCAAGG GTTGAGCCCA CGTAGTATCG CCCTTCGACT ATCTGCACTA
CGTGGCTATT GCGCTTATCT GGTTGAGCTC GAAGTGTTAT CTAGTAACCC AGCCAAGGCG
GTACAAGCGC CTAAACAAGG CAGTCCATTA CCTAAACAGC TTAATGTAGA TGAAATGCAT
CAGCTGCTAG ACTTCGATGA TGACTCTCTC CTTGGGGTTC GAGATAAAGC CATGCTCGAG
CTGACCTACA GCTGCGGCTT ACGTTTAGCT GAGCTGGCCG ATTTAAACCT GAAAAGCCTA
CAAGACGACG GCCAATTAAG GGTCATTGGT AAAGGCAGTA AAGAGCGCAT ACTGCCCGTT
GGTAAAACGG CGTTAAAATG CCTTGGCGAA TGGTTGAAAG TGCGCGGTGT TTTAGCTGAC
GGTGATGAGC CGGCATTGTT TTTAAGTAAA CACAGAAGGC GTATCAGTCA TAGGCAAATT
GCGAAACGGA TGCAGTTGTG GGCCAAGCAG CAGCATTTAG ATCAAGATAT CAACCCACAC
AAATTACGCC ATTCATTCGC CACCCACATT TTAGAATCAA GCGGTGATTT ACGCGGAGTG
CAAGAACTAC TCGGCCATGC GAATTTATCC ACTACGCAAG TGTATACTCA TCTGAACTTT
CAGCATTTGG CTAGCGTATA CGATACAGCG CACCCCAGAG CCAAGCGTCG AAAATAG
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| Protein sequence | MSEQPSLQPL LGKYFDYLKY ERNLAAKSIE NYQRQLASIC QALTITAWPE LTVDHVRQVL
NQARRQGLSP RSIALRLSAL RGYCAYLVEL EVLSSNPAKA VQAPKQGSPL PKQLNVDEMH
QLLDFDDDSL LGVRDKAMLE LTYSCGLRLA ELADLNLKSL QDDGQLRVIG KGSKERILPV
GKTALKCLGE WLKVRGVLAD GDEPALFLSK HRRRISHRQI AKRMQLWAKQ QHLDQDINPH
KLRHSFATHI LESSGDLRGV QELLGHANLS TTQVYTHLNF QHLASVYDTA HPRAKRRK
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