Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4064 |
Symbol | |
ID | 4175853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4886814 |
End bp | 4887992 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638057100 |
Product | hypothetical protein |
Protein accession | YP_663617 |
Protein GI | 109900362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000499298 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCATAA TGCTTAAGCG TATGGTTTTG GGCCTGGTCA TAATGCTGTT GGCCGGCTGT GATCAAATAC AGCAGGCCCC AGATGTGACG CCTGTTGTAC TAGGTAAAAA TGCTGGGATC GCCGGTGGAA CCATGACCGT AAAAGGGCAA TGGATCACTG AGGTCAATGG GGACGTCATG CTTGATCCGC AAACTTCTGG CTTAACGGTA TGGAATGACA AACTCATCTC GTTAAGCGAT AGAAGTGCAG ATGTATCACA GCGTATGCAA TTGCATGTTA TTTCGCCGGA AACGGCTCAG CTTGCACCCG ACACGATGGT GTTTTCGTTA AGTGACAATT TAAAAGACAG TTGCTTTGCC GCCTATATTC AGGGTAATCC TGATTTAGAA GCACTGGTGG CGGTTCCTGA TGAGTCAGGC GTGTTTTTAA CCATTACCGA AGATGCGAGT GATCACAAGG GGCTTAGTGG GAAATGCGCC GCACAATATG GTGAGTCAGG CTCCGTGAAA TATCCCTTTG TGCTTATTCG CCTAGAAGTA CAAGACGATA ACTCAGTGAC AATGACCCAT GCTCGACCTT TAACGTTTGC CACTTCGTTT AATTTGGGTA ATTTTCCTAA TGACGGCATT GAAGGCTTAG CACTTAGCCG CGATGGACAG CTGTATTTCG GCCTTGAAAA AGATGCCGCG GGTCAGGCAC GTATCTTTAC TACAAGGATT ACTGCCGAAA CTTGGCTGCA AGAGGGGTTT ATCGCTGTCG AAGATACTCA GGTTAAACTG CCTCTCTTTA AACACGGTAA TCACCCTATC AATGCACTGG CGATATATGA GCGCGAAGGC AAGGAATATC TATTTGCTGC AGCGCGAAAC GATGAGCAGC TCTGGTTAGT CGATCCTGCC GGTCAACTCG AAACGCTGAT CATAGACCTA GGCTTTTATG CGCCAGTGGC GCAGCCTGAC GAAAAATGCC CGCCGTGGGA GCCGATGGAT AATGGTTCAA TCGAGGGATT GGCCATCATT GACGAAACAT TGTGGATGGT GAATGACCCT TGGAAGAAGG TGTATTTAAA CAATATAAGC TGTGACCAAA ATAGCGCCAA ATTCGAAAAG ATGGCGCCTT TACTGTTTAG TCTGCCCATT CAAGATGCAT GGTTTACCCA AGGCAGGGAA GCCAACTAA
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Protein sequence | MCIMLKRMVL GLVIMLLAGC DQIQQAPDVT PVVLGKNAGI AGGTMTVKGQ WITEVNGDVM LDPQTSGLTV WNDKLISLSD RSADVSQRMQ LHVISPETAQ LAPDTMVFSL SDNLKDSCFA AYIQGNPDLE ALVAVPDESG VFLTITEDAS DHKGLSGKCA AQYGESGSVK YPFVLIRLEV QDDNSVTMTH ARPLTFATSF NLGNFPNDGI EGLALSRDGQ LYFGLEKDAA GQARIFTTRI TAETWLQEGF IAVEDTQVKL PLFKHGNHPI NALAIYEREG KEYLFAAARN DEQLWLVDPA GQLETLIIDL GFYAPVAQPD EKCPPWEPMD NGSIEGLAII DETLWMVNDP WKKVYLNNIS CDQNSAKFEK MAPLLFSLPI QDAWFTQGRE AN
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