Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4041 |
Symbol | |
ID | 4175830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4866510 |
End bp | 4867496 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638057077 |
Product | hypothetical protein |
Protein accession | YP_663594 |
Protein GI | 109900339 |
COG category | [S] Function unknown |
COG ID | [COG5345] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGT ACCTAACCCC AAAATGGTTG CTGAGTATTG CAGCAATACT GTTTTTAATT TTTTGGCTCA TTGCGATTTA TTGGAGCTTT GAACCTGCCA CGTTTGATCC TAAGCAAACC GCTCAAGAAT ACGCCCAGCA ACATAACGAA AAACTAGTCC CCGGATATAC CTTGACGACT AGCTTGATTA CCGTAACAGA GACCCTGTTG AATAAATCTG GTGGATACTT GTCCAATGAT GTTATGCCGC CAGGATTGTT TATGGACAAC ATGCCAAGTT GGGAGTTTGG CGCGTTAGAG ATGACGCGAG ACTTGGCTTT ATCCATGCGT AAAGATATTA GCCGCTCTCA ATCACAATCT AGCGAAAATC CATTTTTGAC CGATGCACAG CCAAAACTAA ATATTGATCA CCGCAGTTGG CTTTTACCTT CTGCTGAATC TCAATATCAA GATGCTATCG ATAAGCTGTA TCAGTACCGC GCAAGTTTAT CTACTAGCCG CCAGGGCACG GCACAATTTT ATGCGCGCGC CGATAACTTG CGTGATTGGG TAAAACAAGT TGAAAAAAGA CTAGGCAACT TGTCACAAAA ATTAAGTGTC AGCGTAGGGC AGGACAGGCT TGATACAAGC TTTGCGGGTG ACAGTAGTGC AGGAGCTATC CCTGCTGAAG AACTGCGTGA GCAAACAAGC TGGTTTCAGT TAGACAACAA TTTCTATGAG GCGCGCGGCG CAAGTTGGGC ATTAATTCAT TTTTTAAAAG CGGTTGAAGT TGATTTCGCA GATGTATTAG ACAAGAAGAA TGCGCGAGTC AGCGTCCAGC AGATTATTCG TGAGCTTGAA TCTACCCAAG AGTCTATTTT CAGCCCCATG ATCTTAAATG GCAGTGGCTT TGGCATGCTA GCAAATCACT CGTTGGTGAT GGCGAACTAT ATTTCCCGCG CGAATGCTGC TCTAATTGAA CTTTCAGAAC TACTAAATCA AGGATAA
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Protein sequence | MQKYLTPKWL LSIAAILFLI FWLIAIYWSF EPATFDPKQT AQEYAQQHNE KLVPGYTLTT SLITVTETLL NKSGGYLSND VMPPGLFMDN MPSWEFGALE MTRDLALSMR KDISRSQSQS SENPFLTDAQ PKLNIDHRSW LLPSAESQYQ DAIDKLYQYR ASLSTSRQGT AQFYARADNL RDWVKQVEKR LGNLSQKLSV SVGQDRLDTS FAGDSSAGAI PAEELREQTS WFQLDNNFYE ARGASWALIH FLKAVEVDFA DVLDKKNARV SVQQIIRELE STQESIFSPM ILNGSGFGML ANHSLVMANY ISRANAALIE LSELLNQG
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