Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4034 |
Symbol | |
ID | 4175823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4857485 |
End bp | 4857994 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638057070 |
Product | uracil-DNA glycosylase superfamily protein |
Protein accession | YP_663587 |
Protein GI | 109900332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0358964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCTGA GCCCTCGTCC AATCATTCAA GGAAATCAGC GCTCAAAGAT ACTTATCGTA GGTCAGGCTC CTGGTATCAA AGCACACGAA ACGAACAAGC CTTGGAATGA TGCTTCGGGC GAACGCTTGA GGAAATGGCT GAATCTAGAC GTTCAGCACT TTTACAATCC AGACAATATT GCAATTCTGC CGATGGCATT TTGTTATCCT GGAAAAGCGT CAAGTGGTGA CAAGCCGCCG CGTAAAGAAT GCGCGCCCCT TTGGCATGAG CGCCTCATAA ACTCCATGCA AATCAAACAT GTTTTATTGA TTGGTCAATA TGCTCAAAAC TATTACTTAC AGGATAAGCG ATCGTTGACG GAAAGAGTAA AAGATTGGCA GGCGTACCAA CCAAGGTTTT TCGTTTTGCC CCATCCGTCT CCAAGGAATA ACATATGGTT GAAGAAAAAC CCTTGGTTTG AGCAGCAAGT AGTATCAGCG ATGCAGCACG CCATTGCTAA GATTATCTAG
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Protein sequence | MPLSPRPIIQ GNQRSKILIV GQAPGIKAHE TNKPWNDASG ERLRKWLNLD VQHFYNPDNI AILPMAFCYP GKASSGDKPP RKECAPLWHE RLINSMQIKH VLLIGQYAQN YYLQDKRSLT ERVKDWQAYQ PRFFVLPHPS PRNNIWLKKN PWFEQQVVSA MQHAIAKII
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