Gene Patl_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4031 
Symbol 
ID4175820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4854904 
End bp4855503 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID638057067 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_663584 
Protein GI109900329 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.224768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGTC AAGAACAAAA GCTTAAGACG AGACGAACCA TTATAGATGC AGCTTTTAGT 
TTACTGGACG AGCAAAGAAG TTTGTCTAGC ATCAGCTTGC GTGAAGTAGC TCGCGCGGCT 
GGCATCGCAC CGACCTCATT TTATCGACAT TTCAAAGACA TTGACGAGCT TGGTTTAACA 
TTAGTCGATG AGGCTGGCTT AAACTTAAGG CAGTTGATGC GTCAGGCTCG ATTGCGGATT 
GCCTCAGGTG GGGGAGTGAT AAACACGTCG GTGGATACGT TTATGGAGTT CATTTGCGCC 
CATAGCAATG TTTTCCGGTT GCTGCTTCGT GAGCATACCG GAACGTCTTT GGCATTTCGT 
GCCGCTGTAT TACGGGAAAT TCAGCACTTT ATTGTTGAGC TAACAGATTA CACTATGAGC 
ACAACAGGGT TGCCCTATCA GTATGCGAAC TTACAAGCAG AAGCTATGGT TAAACTTGTT 
TTTAGTGCGG GTGCAGAAGC GTTGGATTCA GGCGCTGAAC AACAAGCAGT GTTGGCTCAG 
CGCGTTAAGT TGCAGTTGCG ATTTATCGCT AATGGGGCGA AAGAGGCCGC CGGCGTTTAG
 
Protein sequence
MSRQEQKLKT RRTIIDAAFS LLDEQRSLSS ISLREVARAA GIAPTSFYRH FKDIDELGLT 
LVDEAGLNLR QLMRQARLRI ASGGGVINTS VDTFMEFICA HSNVFRLLLR EHTGTSLAFR 
AAVLREIQHF IVELTDYTMS TTGLPYQYAN LQAEAMVKLV FSAGAEALDS GAEQQAVLAQ 
RVKLQLRFIA NGAKEAAGV