Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4027 |
Symbol | |
ID | 4175816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4850510 |
End bp | 4851241 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638057063 |
Product | putative methyltransferase |
Protein accession | YP_663580 |
Protein GI | 109900325 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCAA GCAAAGACGC CATTTATTCA CAACCTCAAC AGGTAAGTGA TTTCCGCTTC GATGATACCG TAGCAGAGGT TTTTCCAGAT ATGATCCAGC GCTCTGTGCC GGGTTATAAC ACCATCGTCG ATGCAATTGG GCAATTGGCT GGACGCTACG CTACAAACAA TTCCAATATA TACGATCTCG GTTGCTCCCT CGGCGCAGTT AGCTTAGCAG CGGCAAAATA CGTAGTGGCT GATAACTGTA GTATCATTGC AGTGGATAAC TCTGAAGCTA TGGCTCAGCG GTGTGCCCGG CACGTAAAAG CGTATAAAGC GAATACTCCC ATAGAGGTGA TTTGCGATGA TTTACAAAAT ATCCACATCG AAAATGCATC AAGTGTGGTA ATGAACTTCA CATTGCAATT TATCGACCCC ACTCAGCGTG ATCAGATTAT TCAGAGCATA TACGATGGCT TAGCACCGGG TGGAATTTTC ATACTTTCAG AGAAGCTTCG CCACGCATCA GAGCAAGGGA ATGAGTTACT AATTGACCTT CATCATGAGT TTAAAAGGCG CAATGGTTAT AGCGAGCTAG AGATAAGTCA AAAGCGTGAA TCAATTGAAA ACATTTTGCG GGCTGAAACG TTTGAGGCGC ATCAAACCAG ACTACAAAAT GCTGGTTTTG ACGATGTCGT ATTGTGGTTT CAGTGTTTTA ACTTTGCCTC CATTGTCGCG ATCAAAAGCT AA
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Protein sequence | MQSSKDAIYS QPQQVSDFRF DDTVAEVFPD MIQRSVPGYN TIVDAIGQLA GRYATNNSNI YDLGCSLGAV SLAAAKYVVA DNCSIIAVDN SEAMAQRCAR HVKAYKANTP IEVICDDLQN IHIENASSVV MNFTLQFIDP TQRDQIIQSI YDGLAPGGIF ILSEKLRHAS EQGNELLIDL HHEFKRRNGY SELEISQKRE SIENILRAET FEAHQTRLQN AGFDDVVLWF QCFNFASIVA IKS
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