| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4015 |
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| Symbol | |
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| ID | 4175804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4839129 |
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| End bp | 4839584 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638057051 |
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| Product | RNA-binding region RNP-1 |
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| Protein accession | YP_663568 |
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| Protein GI | 109900313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000301969 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCAC CCACTATAAT AAATATAATT CTTTCCGTCG TTCTTGCTGT TGCAGGCTAT
TTACTACTAC CTGTCATGGC GGCTAACCTT GATCCTAGCC TCGCGCTAGC TATTGGTTTA
TTGCTTGGCG GTATTCTCGT CCCCATCATT GGTAGCCAAT TTTCTGGTAC TTCTTCTGTT
GCACAACAGG CCGATGAAGA AAATAGTAAA ACTCTATATG TTGGCAACTT GCCTTATCGT
GCAAATGAAC AAGCTGTTCA ACAACATTTT GAATTGCAAG GACAGGTTCA CTCCGTTCGT
TTGATGAAAG ATCGCCGCAC AGGTAAACGC AAGGGCTATG GTTTTGTAGA GATGACAGCT
GCTGGTGCTG AGAAAGCGAT TCAAAACTTG AATGATTCTG AGTTTCAAGA AAGAACGTTG
AAAGTACGCA TGGCTAAAGA CAAAGTCGAA GAATAA
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| Protein sequence | MNSPTIINII LSVVLAVAGY LLLPVMAANL DPSLALAIGL LLGGILVPII GSQFSGTSSV
AQQADEENSK TLYVGNLPYR ANEQAVQQHF ELQGQVHSVR LMKDRRTGKR KGYGFVEMTA
AGAEKAIQNL NDSEFQERTL KVRMAKDKVE E
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