| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3977 |
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| Symbol | |
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| ID | 4175757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4789045 |
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| End bp | 4789992 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057005 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_663531 |
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| Protein GI | 109900276 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCAAC ACACTGACAA TCAACAGCTT CCACCTGCTA TTTTACTCAT GGGGCCTACG
GCTTCCGGTA AAACCGCACT GGCCATTGAG CTTTGTCAGG CCCTTCCCTG TGAAATAATC
AGTGTTGATT CAGCGTTAAT TTATAAAGGG ATGGATATTG GTACCGCCAA GCCCACGGCC
GAAGAGCTTG CTCAAGCCCC CCATCGACTC ATCGACATAC TCGACCCAGT ACAAAGTTAT
TCTGTGGCTG AATTTAGACG CGATGCTTTA GCAGCCATGC AAGATATTAC TCAGCGCGGG
CGTATTCCAT TGTTGGTCGG TGGCACCATG ATGTATTACA AGGCATTAAC CGACGGTTTA
TCCACTTTAC CTCAAGCAGA TCCACTGGTC AGAGCAGAAA TTGAAAAGCA AGCCGAGAAA
AATGGCTGGC AAGCGCTACA TCAGGAATTA CAAGGCATAG ACCCGGTTTC AGCACAGCGT
ATTCACCCTA ATGATCCTCA GCGTTTGAGC CGTGCTTTAG AGATTTATCG CATCAGTGGT
AAATCTATGA CCGAATTAAG TTTGAATAAA CAACCTTCGG CCCCATATCA ATTTTCACAA
TTTGCTATAG CACCATCAGA CAGACATATT TTGCACGATA GAATCGCACA ACGCTTTGAT
ATTATGCTGA ATTCTGGTTT TGAAGATGAA GTTATAGAAT TAAAATCTCG AGCAGATTTA
CATTTAGATT TACCGTCTAT GCGCTGTGTG GGTTATCGAC AAATGTGGCA GTATTTAGAC
GGTGAAAATA TTTACCAAGA AATGCGCGAA AAAGGCTTGG CAGCCACCAG ACAACTGGCT
AAACGCCAAC TAACGTGGTT ACGCAGTTGG CAAAACCTAC ATTGGTTAGA TACCTTTTCA
AAAGACAATT TGACTAATGT GATGAAACTC AGCAGAATTC GTACGTGA
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| Protein sequence | MNQHTDNQQL PPAILLMGPT ASGKTALAIE LCQALPCEII SVDSALIYKG MDIGTAKPTA
EELAQAPHRL IDILDPVQSY SVAEFRRDAL AAMQDITQRG RIPLLVGGTM MYYKALTDGL
STLPQADPLV RAEIEKQAEK NGWQALHQEL QGIDPVSAQR IHPNDPQRLS RALEIYRISG
KSMTELSLNK QPSAPYQFSQ FAIAPSDRHI LHDRIAQRFD IMLNSGFEDE VIELKSRADL
HLDLPSMRCV GYRQMWQYLD GENIYQEMRE KGLAATRQLA KRQLTWLRSW QNLHWLDTFS
KDNLTNVMKL SRIRT
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