| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3973 |
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| Symbol | |
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| ID | 4175753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4783786 |
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| End bp | 4785300 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638057001 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_663527 |
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| Protein GI | 109900272 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGAAA ATTGGGCGCC GAGCAGTTTA TCACAGAAAG TTTTTCTCGC GCAGCAGGTA
CGTCAACAGG AAAAAGCCGC CGCGGCAGCC AGCGGCTATC AGATGTACGC GTTAATGCAG
CGTGCGGGGC AAGGTGTATT CCGCCATCTC AAAGTCATCT TTCCCTATGT GCATAATTTA
CTAGTAGTAG TAGGTGCCGG CAACAATGCG GGTGACGGCT ATGTGGTTGC CACCTTGGCT
AAATTTTTTG GCTGGCAAGT GACAGTAGCC GCCCTTGTTC CGGATAAACC ACTGCACGGT
GATGCCTATA CTGCGCAGCA GACTTGGTTA TCAGAAGGCG GAGAGATTAT TCCATGGCGA
GATGCAGATT TTTCAATTTA TGACGTTGTC GTCGATGGCA TTCTCGGCAC AGGATTAAAT
GGCCAAGTTA GAGATGACGC TCTTGATCTC ATCAATGCTG TTAACGCGTC GAACCTGCCA
ATATTAAGCA TTGATGTACC TTCAGGGCTA AATTCTGATA CGGGCGTTCC ACTTGGTGCC
TGCGTACAAG CCGATTGTAC CGTCACGGTA GTTGCCCTAA AAGCGGGCTT GCTGACAGGA
CAAGGCAAAT CATATTGCGG CAAGCTCATC TATGATGATT TAGATATAGC AGACGCTTTC
AATGCGATTG CCACGCCTCA TGCTTACTTG GTCAATTATG CCCACTTACC CACACTGAAT
AAACGTGAAA CCAATGCCCA CAAAGGCCAC TTTGGCCGTT TACTGACACT GGGTGCCAAT
ACAGGCATGC CAGGCTCGTT ACGTTTGACG AGTGAAGCCG CACTTCGCAC AGGCGCAGCG
CTAGTGCGAG CTTATTGCCA TGGTGACAGC CGATTGCCTA TCTCCATGGG TCGCCCAGAG
TTAATGTTAG CCAGCGACCA ACTTTCATCA CAACTTAATT GGTGTTCCTG CATCGCTATG
GGACCAGGTT TAGGCACTGA CGAATGGGCT GTGTCCTTAT TTAATGAGGT AATGAACCAT
TTACATTCGA CGCAAAAGCC CTGCGTTATT GACGCCGATG GACTCAATTT GCTGGCAGAC
GGTAGTGCTT CACACCAAAG CGCGTTGTCA AAAGAGCGCA GTGTGATCAC TCCTCACCCA
GGAGAAGCAG CGCGTTTGCT GGGTAGCAGC GTTGCCGAAA TCGAGCAAGA CCGTATAAAA
GCAGCCCAGG CACTGGCGAA CAAATATAAT ACCATAGCGG TACTTAAAGG AGCTGGCAGC
ATCATTAGCA ATGGTGAACA AAGCTGGATT TGCACTGACG GCAATCCTGG TATGGCAACC
GCCGGGATGG GCGATACACT CACGGGGATA ATTGCTGGGC TTCTTGCCCA AAAGATGACG
GCCACGCAAG CGGCTTTATA TGGGGTATGT TTGCACGCAA ACGCTGCGGA TAACGTTGCC
CACCAATATG GTCAACGTGG TATGCTTGCC AGCGATCTTT TTGAACCTTT ACGAGTATTA
GTTAATCCCA CATGA
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| Protein sequence | MTENWAPSSL SQKVFLAQQV RQQEKAAAAA SGYQMYALMQ RAGQGVFRHL KVIFPYVHNL
LVVVGAGNNA GDGYVVATLA KFFGWQVTVA ALVPDKPLHG DAYTAQQTWL SEGGEIIPWR
DADFSIYDVV VDGILGTGLN GQVRDDALDL INAVNASNLP ILSIDVPSGL NSDTGVPLGA
CVQADCTVTV VALKAGLLTG QGKSYCGKLI YDDLDIADAF NAIATPHAYL VNYAHLPTLN
KRETNAHKGH FGRLLTLGAN TGMPGSLRLT SEAALRTGAA LVRAYCHGDS RLPISMGRPE
LMLASDQLSS QLNWCSCIAM GPGLGTDEWA VSLFNEVMNH LHSTQKPCVI DADGLNLLAD
GSASHQSALS KERSVITPHP GEAARLLGSS VAEIEQDRIK AAQALANKYN TIAVLKGAGS
IISNGEQSWI CTDGNPGMAT AGMGDTLTGI IAGLLAQKMT ATQAALYGVC LHANAADNVA
HQYGQRGMLA SDLFEPLRVL VNPT
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