Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3951 |
Symbol | |
ID | 4175731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4761391 |
End bp | 4762359 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056979 |
Product | proline iminopeptidase |
Protein accession | YP_663505 |
Protein GI | 109900250 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAC TCTATCCTGC AATTAAACCG TTTTTCAGCG AAATGCTAGC GGTTAGCGAC GATCATTCGT TATATCTGGA ACAAAGTGGT AACCCAAAAG GAATACCTGT GCTGTTTCTA CACGGGGGGC CAGGGGCAGG ACTGTTTGCT AATTATCGTC GCTTCTTTGA TCCCGATAAG TACTGGATTA TTGGCTTTGA CCAAAGGGGA AGCGGGCAAT CCACTCCATT CGGTAGCATA AAGAACAATA CTACCCAAGA TTTACTAAGT GATATTACCC AGATCAGAAA GCACCTGGGT GTCCAGCAGT GGATCTTATT TGGTGGTTCT TGGGGTGCAA CGTTGGCATT ACTTGCTGCC ATTGAGCATC CTGAAACGGT GAAAGGGCTG ATCTTAAGAG GCAGTTTCCT GGCGCGAGAA GAAGATTTCG ATTGGTACCT GGATAAAAAA GGCGGAGCTG CGCAGCTGTT CCCAGACTAC TATCAAGATT TCATCCTCCC TGTGGCAGAT AAGTCCCTTA CGACGTCGTT AGTTGACGCG TACTATGAAC TGTTTACTGG CAGCGATGAA GTGCACAAAA TGGCAGCCAT TAAAGCATGG TGTTTGTGGG AAGCCAGAAT CAGTAAGTTG CACTGTAAAT TACATGAAGA TGAGTTGGTC CCGGATGTAC ACAGGGGCAT TAGTTTGGCT ATTTTAGAGT GCCATTACAT AAAGCATCTT TGTTTCATTG AGTCAAATTA CATATTAAAA AATATACACA AAATCAGTCA TATATCGGCA ACACTCATTC ATGGTCGCTA TGACTGTGTG TGCAAAATAC AAGGTGCCTA TTTACTTAAC GAAGCTTGGC CTGCAAGTCA GCTTACCATA GTGCCCGAGT CTGGTCACAG CGCCAATGAA CCCAAAATTA CTGCCGCTCT CTGTTTGGCT TCGACCGCGA TGGCTGATTT TATTAAGGAG CAGGAATGA
|
Protein sequence | MSELYPAIKP FFSEMLAVSD DHSLYLEQSG NPKGIPVLFL HGGPGAGLFA NYRRFFDPDK YWIIGFDQRG SGQSTPFGSI KNNTTQDLLS DITQIRKHLG VQQWILFGGS WGATLALLAA IEHPETVKGL ILRGSFLARE EDFDWYLDKK GGAAQLFPDY YQDFILPVAD KSLTTSLVDA YYELFTGSDE VHKMAAIKAW CLWEARISKL HCKLHEDELV PDVHRGISLA ILECHYIKHL CFIESNYILK NIHKISHISA TLIHGRYDCV CKIQGAYLLN EAWPASQLTI VPESGHSANE PKITAALCLA STAMADFIKE QE
|
| |