| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3933 |
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| Symbol | panB |
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| ID | 4175713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4744993 |
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| End bp | 4745790 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056961 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_663487 |
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| Protein GI | 109900232 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0643267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG TCACAACTTC CACGTTGTTG AAAATGAAGC AACAAAGCGA AAAAATTAGT
GCGCTTACCG CATATGATGC GAGCTTCTCA AAATTGTTTG ATGAGCAAGG GATAGACGTA
CTGCTGATTG GTGACTCGTT GGGCATGGTT TTGCAAGGCT GTGACGATAC ATTAGGCGTC
AGCATTGATG ATGTGGCCTA TCACACTCGG GCTGTGCGTA AAGGCGTTGA GCGCGCATTT
GTTATCGCAG ATATGCCGTT TATGTCTTAT TCCACCCCAG AGCAAACCTA CTTGAACGCG
GCAAAGCTAA TGGCTGCTGG TGCAAGTATG GTCAAACTTG AAGGCGGTCG CTGGTTACTT
GAGAGCATTC AAGGTTTAAA TGAGCGTGGT GTCCCTGTTT GCGGTCATTT AGGCTTAACA
CCTCAGTCAG TACACGTTTT CGGGGGCTTT AAGGTACAAG GCCGCGATGA TCTGCAAGCA
GAGCAAATGC TCGAACAGGC CAAAGAAATG GCAGCGGCGG GTATACAGTT GTTGGTACTT
GAGTGCGTAC CGACAGAACT GGCAGGTGCG ATATCTCAGG CAGTTGATAT TCCGGTTATA
GGAATTGGCG CGGGTCCAGA AACCGACGGA CAAATTTTAG TGATGCACGA CATGTTTGGT
ATCAGCGCCA ATTACATGCC AAAATTTTCA AAAAACTACC TTCAAGAGAC TGGCGATATG
CGCACAGCGG TGAGTCAGTA TATAGAAGAA GTGAAAGACG GTTCTTTCCC GTCTGAAGCC
CATAGTTTCA GTAAGTGA
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| Protein sequence | MKKVTTSTLL KMKQQSEKIS ALTAYDASFS KLFDEQGIDV LLIGDSLGMV LQGCDDTLGV
SIDDVAYHTR AVRKGVERAF VIADMPFMSY STPEQTYLNA AKLMAAGASM VKLEGGRWLL
ESIQGLNERG VPVCGHLGLT PQSVHVFGGF KVQGRDDLQA EQMLEQAKEM AAAGIQLLVL
ECVPTELAGA ISQAVDIPVI GIGAGPETDG QILVMHDMFG ISANYMPKFS KNYLQETGDM
RTAVSQYIEE VKDGSFPSEA HSFSK
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