| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3928 |
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| Symbol | |
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| ID | 4175708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4739988 |
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| End bp | 4740758 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056956 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_663482 |
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| Protein GI | 109900227 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAATC GCACCATGAT TGCGCTGCAA ACACTATGGA TAAAAGAGTG CACTCGCTTC
TTGCGTATTT GGATACAAAC GCTTGTGCCA CCAGCGATTA CGATGTCCTT GTACTTTGTG
ATATTCGGTA ACTTAATTGG CAGTCGCATC GGCCAAATGG GCGGCTTTAG CTACATGGAG
TTTATTGTAC CTGGGCTGAT TATGATGGCA GTGATCACCA ATTCATATTC AAATGTATCC
TCCTCTTTTT ACAGTGCTAA GTTTCAGCAC AACATTGAAG AATTGTTAGT GGCACCCATT
CCAAACTGGG TGATCATAGC GGGTTTTGTG GGCGGCGGGG TCGCACGGGC GATACTCATT
GGTATTATCG TGACATGTGT ATCCATGTTG TTTGTCGATA TAAGCCTGCA CAGTATTCCC
ATTATTATCA TTACCTTGCT ATTAACGTCG ATTTTGTTTG CTACCGCAGG CTTAATTAAC
GCCATATTTG CTAAGTCGTT CGATGATATC AGCGTGGTAC CTACCTTCGT GTTGACGCCA
TTGACCTACT TAGGCGGGGT GTTTTATTCG TTAACATTGT TGCCTGAATT CTGGCAATGG
GTCAGTAAAA TCAACCCTAT CGTGTACATG GTGAATGGCT TCCGCTATGG GTTTTTAGGG
GTGTCTGACG TGGATTACAT GTACTCATTG GGTTTGTTAG TGGTATTTAA TGTGGTGTTG
CTAGGTTTTG CGTATTCACT GATTAATCGC GGCGTTGGCA TTAGAAGCTA G
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| Protein sequence | MGNRTMIALQ TLWIKECTRF LRIWIQTLVP PAITMSLYFV IFGNLIGSRI GQMGGFSYME
FIVPGLIMMA VITNSYSNVS SSFYSAKFQH NIEELLVAPI PNWVIIAGFV GGGVARAILI
GIIVTCVSML FVDISLHSIP IIIITLLLTS ILFATAGLIN AIFAKSFDDI SVVPTFVLTP
LTYLGGVFYS LTLLPEFWQW VSKINPIVYM VNGFRYGFLG VSDVDYMYSL GLLVVFNVVL
LGFAYSLINR GVGIRS
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