Gene Patl_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3876 
Symbol 
ID4175656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4671660 
End bp4672163 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID638056904 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_663430 
Protein GI109900175 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCC GTACATCGTT TACCCCGCTG TGTACCTATT TACCCACGCC ATGTGGCCTA 
CTAAAAATAA GTGCGAGTAA TGACGCTATC ATCGCTATTA CCTTTGTAGA GCATCCAGAT
ACAGCTGCCA CCAGCAATGC GTTATTGAAG CAAGCGAGAC AGCAACTGAA AGAATATTTT
GACCGCGACC GTGAAGCGTT TGATTTGCCC CTAGCCCCCA TAGGTACTAA TTTTCAGAAG
AATGTTTGGC AACAGTTACG CGCCATACCT TATGGTGTTA CATGTAGCTA TGGCGATATA
GCAAAGCAAT TAAACAACCC TAACGCCGTG CGGGCGGTGG GCAGCGCTAA TGGCAAGAAT
CCTATCTCGA TTATCGTGCC TTGCCATAGA GTGATTGGGG CCAACGGCAC ACTGACGGGA
TACGCCGGCG GCTTAACACG CAAAGCCACT TTACTGAGTC TAGAAAACCC ACAATTCAAC
GCATCACCAG CAAAAATTAG CTGA
 
Protein sequence
MESRTSFTPL CTYLPTPCGL LKISASNDAI IAITFVEHPD TAATSNALLK QARQQLKEYF 
DRDREAFDLP LAPIGTNFQK NVWQQLRAIP YGVTCSYGDI AKQLNNPNAV RAVGSANGKN
PISIIVPCHR VIGANGTLTG YAGGLTRKAT LLSLENPQFN ASPAKIS