| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3861 |
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| Symbol | |
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| ID | 4175641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4656283 |
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| End bp | 4656921 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056889 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_663415 |
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| Protein GI | 109900160 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTTT CTTCACGCAA AGGGGAAAGC CTAGCCCATC TGTTAAAACA AGAAGGCATA
GTCAATGCTT CAGTCCTAAA TGCGGTGGCT TGTACGCCCA GAGAATTATT TTTGCCTGAC
GCGTTACGCC ATAAAGCATA TCAAAATACC GCTTTACCGA TTGGTCAAGG TCAAACCATT
TCTCAGCCTT ATATTGTAGC GAAAATGACA GAGTTATTGT TGGCCTCAAG CAATGCACCA
AAGGCGGTAC TGGAAATTGG CACTGGCTCA GGTTATCAAA CCGCTATTTT GGCTCAGCTG
TTTGATAAAG TGTTCAGTGT TGAGCGCATC AAAAGTTTGC AATTTCAAGC TAAACGCAGA
ATGAACCAAT TGGATTTACA TAATGTCTCT ATGAAACACG GTGACGGTTG GCAAGGTTGG
TCTAGTAAAG GGCCGTTTGA TGCCATTATC GTGACCGCAG CGGCAAGCCA AGTACCTGCT
AAATTGGTTG AACAACTGAA TGATGGTGGT CGGCTTATTA TCCCTGTAGG GGAACAAAGC
CAGCAACTAC ATTGCATTAC TCGCGTGGGT GAAGGGTTCA ACGAACAGAT AATTGAAGCG
GTACGCTTTG TGCCTCTTGT AGCGGGTGAC ATTATTTGA
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| Protein sequence | MRVSSRKGES LAHLLKQEGI VNASVLNAVA CTPRELFLPD ALRHKAYQNT ALPIGQGQTI
SQPYIVAKMT ELLLASSNAP KAVLEIGTGS GYQTAILAQL FDKVFSVERI KSLQFQAKRR
MNQLDLHNVS MKHGDGWQGW SSKGPFDAII VTAAASQVPA KLVEQLNDGG RLIIPVGEQS
QQLHCITRVG EGFNEQIIEA VRFVPLVAGD II
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