| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3845 |
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| Symbol | |
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| ID | 4175625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4639991 |
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| End bp | 4642279 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056873 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_663399 |
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| Protein GI | 109900144 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACCA AGCTAAAACG CATCGTTAAA GAGGTCAATC AAACTCCCGT CCTAGATGAT
GCGCTTAGCG GTGTGGCAAA GAGTCTTAAA GAGGCCATCA AGGTCGACTC TGTCAGCATA
TATTTAGCCA ACTACGAAAA GCAGCACTTT ACGCTGCGAG CCACAGAAGG CCTGGCGAAA
TCTGCTATTG GAAATGTATC GATAGGGTTT TCTGAAGGGC TGATCGGCTT AATTGGCCAG
CGCGAAGAGC CAATCAACAT AAGTAATGCG CAAACCCACC CCAGATTTAA ACATTATCCT
GAAGTACAAG AAGAGCAATA TCACGCCTTT TTAGGTGCGC CTATTATTCA TCAACGAAAA
GTATTGGGCG TGCTGACACT ACAACAGCAA CGAAAGCGTC TTTTTAGCCA AGATGAAGAA
GCGTTCCTAG TGACACTCGC AATGCAGTTG GCCGTTGAAA TTGTTAATGC TGAAGCCCGT
GGCCGATTTA GCTTGAGCGA TGACCACCCC GAACAAAATG AGATAAAAAG TGTCAAGGGT
GTGCCGGGCT CTTCGGGTTT AGCGGCCGGG GTTGGCGTGG TACAAAATTT ACTGGTTAAT
CTACGCAACC ACGTACCAAA ACGCAGTGGC GATCGGGAAA CCCAAATACA GAATTATCGC
TCTGCGGTTA TGCAAACTCG GGAGCAAGTT GAGGTCTTAT CTCAGCGAAT TCAAGGAGAG
GTGCCCGATG ACGTGCAAGC TATTTTCACC CTTTACCACC ATCTACTGGA TGCGAACAGC
TTAGGCCGTG AAGTAGAGCA GAAAATAACA CTTGGATGGG ATGCTGCAAC GTCTTTAAAA
ATGGTGGTTG AAAACTATAT CACTCAGTTC CAAGGCATGA GCGATGCCTA TATGCGTGAA
CGCGCAGTGG ATGTAGAAGA TCTTTCCAAT CGCATTTTAG CGAATCTCCT TAATCTTGAT
ACCAGCCGTT TAACGCGTGA AGAGCTGCCA GAAAAATGTA TTTTGGTAGC AGAAGAGCTG
ACGGCGACCA TGCTTGCTGA ATTCCCTAAA GGTAAGCTCT GCGGCCTGAT TTCGATTCGT
GGCTCTAGTA ACTCTCATGC AGCAATAATG GCTAGAGCAT TGGGTGTTCC CGCGGTTATG
GGGGTGACAG GTGTTCCACT ATCCCTACTC GATAACAAAG ACATTTTACT GGATGGTTAC
ACCGGCGGGA TTATTGTTTC GCCTAATCAG ACCATTGAAC GAGAATTCCA GCAGCTTATA
CATGAAGAAA AGCTGTTAAG TGATAAAATT CTTGCACAAG ACGACCTGCC AGCCGTAACG
AAAGATAATT GCTTGCTTAG CCTATTGGTA AATGCAGGGC TGTCGGCCGA TATCGAAAAT
ACCTACTCTA GTTACGCTGA TGGTGTGGGG CTATTTCGTA CTGAAATTCC GTTTATGATG
CGTCAGCGTT TCCCTACCGA AAAAGAGCAA GTTGAACTCT ATAGAGCAAT GTTAAGCGCT
GAGCCAGACA AACCTTTCAC CATGCGTACG TTAGATGTAG GCGGTGACAA GCCTTTGCCG
TATTTCCCTA TGACTGAGGA AAACCCTTTT CTAGGCTGGC GAGGTATCCG CTTAACACTT
GACCATCCAG AGGTGTTTTT GGTGCAAATT CGCGCCATGT TACGCGCCAG TATCGGGTTG
CAAAACTTGC AAATTATGTT GCCTATGATC ACATCGGTAA GTGAAGTGCT AGAAGCCAAG
AGGTTAATAA GTCAGGCCTT TTTCGAAGTG CAAGAAGAGG CGAAAGTTCA AGATGGTACG
CTGTATCATC CTAAAATCGG TGTGATGCTT GAAGTGCCGG CGGTTATTTA TCAACTGCCT
CAGTTAGCAA AAATTGTCGA CTTCTTTTCA GTGGGCAGCA ATGATTTAAC CCAGTATTTG
CTGGCAGTCG ATAGAAATAA CGCGCGGGTT TCTGAGCTGT ATGATAGCTA TCATCCGGCT
GTGTTAGCAG CGCTGTACAA TATTGCGCAG CAAGCCAACG ACTTAAACGT ACCCATTACT
TTATGTGGTG AATTAGCCGG GGAGCCTGGC GGAACAATCC TATTAATGGC GATGGGATAC
CGAAAACTAA GTATGAACAG TCATAGCTTA CTCAAAATAA AATGGGTTGC CCGCAGCGCT
AATTTGAATG ATGCGAAAGC ATTACTTAAT GAAGTGTTAA CCATGAGCGA CCCGAAAGAC
GTGCGCGAAC GGGTAAACCT TTATCTTGAA TCGATTGGTC TTGGCGGCTT GATCCGCGCG
GGTATTTAG
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| Protein sequence | MLTKLKRIVK EVNQTPVLDD ALSGVAKSLK EAIKVDSVSI YLANYEKQHF TLRATEGLAK
SAIGNVSIGF SEGLIGLIGQ REEPINISNA QTHPRFKHYP EVQEEQYHAF LGAPIIHQRK
VLGVLTLQQQ RKRLFSQDEE AFLVTLAMQL AVEIVNAEAR GRFSLSDDHP EQNEIKSVKG
VPGSSGLAAG VGVVQNLLVN LRNHVPKRSG DRETQIQNYR SAVMQTREQV EVLSQRIQGE
VPDDVQAIFT LYHHLLDANS LGREVEQKIT LGWDAATSLK MVVENYITQF QGMSDAYMRE
RAVDVEDLSN RILANLLNLD TSRLTREELP EKCILVAEEL TATMLAEFPK GKLCGLISIR
GSSNSHAAIM ARALGVPAVM GVTGVPLSLL DNKDILLDGY TGGIIVSPNQ TIEREFQQLI
HEEKLLSDKI LAQDDLPAVT KDNCLLSLLV NAGLSADIEN TYSSYADGVG LFRTEIPFMM
RQRFPTEKEQ VELYRAMLSA EPDKPFTMRT LDVGGDKPLP YFPMTEENPF LGWRGIRLTL
DHPEVFLVQI RAMLRASIGL QNLQIMLPMI TSVSEVLEAK RLISQAFFEV QEEAKVQDGT
LYHPKIGVML EVPAVIYQLP QLAKIVDFFS VGSNDLTQYL LAVDRNNARV SELYDSYHPA
VLAALYNIAQ QANDLNVPIT LCGELAGEPG GTILLMAMGY RKLSMNSHSL LKIKWVARSA
NLNDAKALLN EVLTMSDPKD VRERVNLYLE SIGLGGLIRA GI
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