| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3834 |
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| Symbol | |
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| ID | 4175614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4628897 |
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| End bp | 4630150 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056862 |
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| Product | major facilitator transporter |
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| Protein accession | YP_663388 |
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| Protein GI | 109900133 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA AAACGTTACG CCAGGCGTTG TTAAATAAGC GCATGCTTAT TTGTATTTGC
ACTGGTTTTT CCTCCGGTCT TCCCCTTTAT TTATTGATTC AATTTGTGCC AGCTTGGCTT
CGCTCAGCTG ACATTGATTT GTCTACCATT GGCTTGATTA ATCTCGTCCT GTTTCCTTAC
ACATGGAAAT TTATCTGGTC CCCAGTCATG GACCGCTTCG TGGTACCTAT GCTCGGCAGG
CGACGAGGCT GGATGTTCAT TACCCAAGTG GCGCTGATTG TGTTGATGAG TATGTTGTCT
TTTTATGACC CTGCAACAGA CATCAGCCAT ATTATAGTGA TTGTCGCGGC TATCGCTTTT
TTCAGCGCCA GCCAAGATAT TGTTATTGAT GCCTATCGCC GAGAATTACT ACCGGACGAT
GAATTGGGAG CTGGGAACGG CTTTTATGCT CAGGCGTATC GCATCTCTTC ATTTGTACCC
GGTTCGTTAG CGATGATTTT AGCGGGCTTC TATCCTTGGT CAGTGGCGCA TATGAGCATT
GCTGTATTTA TGTTGGTCGG TCTAGTGACC ACGCTAATGA TTAACGAAAC GTCCAAAGCA
GGGGACGAAC CACAGACACT GCGCTCAGCG GTGGTAGAGC CTTTTGTGGA GTTCTTCCAG
CGTCAAGGTT GGCAGCAAGC GGTACTTATC TTACTGTTTA TCATGTTTTA TAAACTAGGC
GACAGTATGG CCACCGCCCT AGAAACACCA TTCTTTCTAG ATATGGGCTT TTCCACGGTA
GAAATAGGCT CAATTGCGAA AATAGCCAAA ACTATTGGAG CAACAGCGGG GACAATTCTT
GGCGGGGTAG CCATGATCAA ACTGGGTATT AATCGAAGCT TGTGGGTGTT TGGCGTCTTT
CAATTGATAT CTATTTTGGG TTACGTCATG TTATCCATGG TGGGGTATAA CCATCTTGTG
TTGGCGATTG CTAGTGGCTT TGAATATTTT GGCGTTGGGC TGGGCTCCGT AGCGCTTATC
GCGTTTATGG CTAAATCGAC TAATCGCCAT TTTACTGCTA CACAGTTCGC TTTGTTTTCG
AGTATTGCGG CGGTGCCACG CACATTTGTA AGCGCCACGA CAGGTTATGT TATCGAAGCG
GTGGGTTACA CCCAGTTTTT TATTATCTGT TTTGTGTGCG CTATTCCAGG AATGTTAATG
CTGCTAAAAA TAGCACCATG GAATGCAATT AAAAGCGAGG AAACACAACC ATAA
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| Protein sequence | MNNKTLRQAL LNKRMLICIC TGFSSGLPLY LLIQFVPAWL RSADIDLSTI GLINLVLFPY
TWKFIWSPVM DRFVVPMLGR RRGWMFITQV ALIVLMSMLS FYDPATDISH IIVIVAAIAF
FSASQDIVID AYRRELLPDD ELGAGNGFYA QAYRISSFVP GSLAMILAGF YPWSVAHMSI
AVFMLVGLVT TLMINETSKA GDEPQTLRSA VVEPFVEFFQ RQGWQQAVLI LLFIMFYKLG
DSMATALETP FFLDMGFSTV EIGSIAKIAK TIGATAGTIL GGVAMIKLGI NRSLWVFGVF
QLISILGYVM LSMVGYNHLV LAIASGFEYF GVGLGSVALI AFMAKSTNRH FTATQFALFS
SIAAVPRTFV SATTGYVIEA VGYTQFFIIC FVCAIPGMLM LLKIAPWNAI KSEETQP
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