Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3814 |
Symbol | |
ID | 4175594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4600037 |
End bp | 4603918 |
Gene Length | 3882 bp |
Protein Length | 1293 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638056842 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_663368 |
Protein GI | 109900113 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCA CTGCCAGTGA GCAATCGATA CCTAACCTTC ATTCTTCATC TGATACAAAT GGCTCAGACG CCAAGCGCTG GGATTTTTGG ATCGACAGGG GCGGTACGTT CACTGACATC GTAGCGAAAA CACCCCAAGG TCAGTTTCTA ACGAGAAAGC TGCTGTCTGA AAATCCAACG GCTTACGAAG ACGCTGCTTT GCAAGGTATT CGTGATTTTC TAAATGTTGA GGCCACTGCG CCTATCCCGA ACCAATTGAT TAGCAGCGTG AAAATGGGCA CAACCGTGGC TACCAATGCG TTGCTAGAGC GCAAGGGCGA GCCCACCGTG CTTATTATCA CTGCAGGTTT ACGGGATGTG CTCGAAATAG GCTATCAAGT GCGTCCAAAA ACCTTCGCCT TAAATATTGA AAAACCTGAA GTGTTGTATC AAGACGTTAT CGAAGTGTCT GAGCGTTTCG ACGATGAAGG AAACGAGCTA GTCGCACTAT GCGAGGAGAC TGTGCGCCAA GAACTTCAGC AGCGCTATGA GGCAGGGTTT CGTTCGGTCG CCATAGTATT AATGCATGCG TATAAATTTC CCGAGCATGA ATTACGAATT GCGGCGATTG CCAAAGAAAT TGGTTTTAGC CAAATCAGTA CCAGTCACGA TGTAAGCCCC ATGGTGCGTA TTGTACCAAG AGGCGATACC ACAGTGGTTG ATGCCTATTT ATCGCCTATT TTACGTCGTT ATGTGCAACG AGTTGGGGCA GCAATTGGCG CTGAGACAGG CGGAGGCACA AGTTCAAAAA CAAGTACTGG TACCGATGAA AACACTGCTA TGGTTGAAGC AAAATCGGTG AGTAGTGATA GCAAGCGCCT GCAGTTTATG CGCTCATCCG GCGGTTTAAC CGCAGCGAGT AAATTTCAGG GCCGGGACGC GATTTTATCT GGCCCTGCTG GTGGCATTAT CGGGGCCGTG CGCACTAGCG AATTAGCCGG TTTTAATAAA ATCATCGGTT TTGATATGGG CGGCACCTCT ACGGATGTCT CTCATTATGC AGGGGATTTT GAACGCGCCT TTGAAACCCA AGTGGCTGGT GTGCGCATGA GTGTACCCAT GATGAGCGTG CATACGGTAG CCGCAGGCGG TGGTTCAATA TTACACGTTG ATGAGCAACG CTTTCGCGTA GGGCCGGAAT CAGCGGGGGC ATTTCCTGGC CCCATGTCTT ATCGAAATGG CGGGCCGTTA ACCGTGACCG ATGCCAACGT GTGCTTGGGC AAAGTTGACC CGCGCTTCTT CCCTAAATTA TTTGGGCCCC AGCACAACCA AGCTATTGAT GATGAGGCCG TTAAAGCTGC CTTTGCAGAG ATTGCCCAAC AACAAAGCAC GCAAAGCAGC CCAGAACATG TGGCTGAAGG CTTTTTGACC ATAGCCATTG AACATATGGC CCAGGCGATC AAGAAAATTT CCATTGAGCG TGGGTACGAC GTGCAGCAAT ACGCCTTAAC CTGTTTTGGC GGCGCAGGCG GCCAGCATGC GTGTTTAGTA GCAGACCGCT TGGGCATGCA AACTATCTTT ATTCATCCTT TTGCCAGTAT TTTGTCGGCT TATGGTATGG GGCTGGCGGA TATCCGCAGT CAACGCACGG AAACCTTTCA AAAAGTGATG GATCCCAGTG GCCTTGAGGC GCTCAATGCT GCCTTTGCTC GTTTAAAAGC GCACACCAGT AAGGAGCTTA AAGATCAAGG AATTGAAGAT GCCGAGCAAA GCCATAGCGC AACGGTATTT TTACGTTATC AGGGCACCGA TACGACTCTG CCAATAAGCC AAGCCACTAT CGATCAAATG CAGCAAGACT TCGAAGCTCA ACACGCAGCT CAATATGGCT TCATCTCCCC TGATAAAGCC ATCATCGTTG AATCTATCTC TATGGAGTCT GCGGGTGGGG GGCAATATAT TGATGAGCCT GTTTATCCTC TTGCTGAATC AGCCGTGCCT GATGCCCAGT ACACGACCCA AGTATTTTCA GGAGGAGCGT GGCACAACAC GCCTATTTAT TCGCTAGCTG AGTTGCTGCC AGGTCATCAA GTTCAAGGCC CGGCGATTAT TATAGAGGAC AATGGCACCG TTATTGTGGA GCCAAATTGG CTTGCAAGCA TGACCGAGCA CAAGCATTTG GTGTTGAAAA AGAGAGCAGT CGACGCCTTG GAAAACAGCG ACACTCAAAA TACACCAGCG GTTAGTCATG AGAAAAGCGA TCCTGTGCTG GTGGAAATCT TCAATAACCA GTTTATGTCG ATAGCGGAGC AAATGGGTAT AGTGCTGCGC AATACGTCAT CTTCGGTCAA CATCAAGGAG CGATTGGACT TTTCCTGCGC CGTGTTTGAC GTGCAGGGTC AGCTAATTGC TAATGCGCCA CATATTCCGG TGCATTTGGG GTCGATGGAT GCCACGGTGA AAGTGCTTAT TCAGAGCGGC CTGAGTATTG AAGTAGGTGA TGTGTTTATT CACAACGATC CTTTTAACGG CGGCTCTCAC TTACCTGATG TGACGGTGAT CACCCCTATC TTTGATCAGC AGAAAGAAAA CGTAATGTTC TTTGTGGCCA GCCGCGCGCA TCACGCAGAT ATAGGTGGTA TTGCACCAGG CTCTATGTCA CCGAAGGCTA AAACTATTAT TGAAGAAGGC GTGGTGATCC CGTGCATGAA GTTGGTCTCA AAGGGGCGCT TTCTGCATGA CGAGCTGCAA GCATTGATGC AAGGTGCGAC TTATCCGGTA CGTAATTTCA ACCAGAATGT GGCCGACTTA CAGGCTCAAA TCGGCGCTAA TCGCCGAGGT TATCAAGAGT TACTTAAATT AGTCGATGAA CACACCTTGG GTGTAGTGAA CACCTACACC CAACATATTA TGGATAATGC TGAAGAAAGC GTAAGGCGCA CCATAGACAC TCTACAAGGC GGCGAGTACC GCTACGAGAT GGATGGCGGC TTACATATTT GCGTGAAAGT AGCAGTGGAT CACGCTAATC GCAGTGCCAG CATCGATTTT ACTGGCACGA GCCCCCAGCA GCCGAATAAT TTCAATGCGC CTGGGGCGAT TACGCAAGCC GTTGTGCTTT ATGTTTTTCG CTGCCTGGTC GATAGCGATA TCCCGTTAAA CGCAGGCTGC ATGCGCCCAC TCAGCATTCT TGTGCCAGAG GGGTCAATGC TTAACCCTGT TTACCCCGCG GCCGTGGTTG CCGGTAACGT AGAAGTCAGC CAAGCGGCGA CTAACGCATT GTTCGGGGCG TTGGGTACGC TCGGCATGAG CCAAGGCACT ATGAATAACC TGACGTTCGG TAATGCGAAG TACCAATATT ATGAAACCAT TTGCTCTGGC GCCCCTGCAG TTCCTGGTTT TGATGGCGCA GCGGCAGTGC ATACCCACAT GACAAACTCA CGCTTGACGG ATCCTGAGAT TCTAGAGTCT CGTTACCCCG TATTGTTGGA CAAGTTTATC GTACGCAGAG GTTCGGGCGG CAAAGGCCAA TGGGATGCGG GTGACGGTAT CGAAAGACGC ATTCGCTTTT TAGCGCAGAT GCAGTGCGCA ATATTGTCTG GCCATCGGGA AGTCCCGCTA GCCGGTGTTA ATGGGGGGGA TTCAGGTGAA CTTGGGCATA ACTGGATTGA GCGTAACGGC CAGAAATGGT TAGATTTGAC CGGCAACGGT GAAACCCAAG TACAAGTAAA TGATGTAGTG GTTATTCAAA CACCTACTGG CGGCGGGTTT GGCAGTGTTT TTGATAAAAC GACTGATAAA GCGACTGATA AAAAAACGGT AGACAAAAAG AGAGTAGACA AAAAGAGAGC AGACAAAAAG ACGCAAGGTA AAAAGACAGA TACCACTGGG CAAGGAGAGT AA
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Protein sequence | MTRTASEQSI PNLHSSSDTN GSDAKRWDFW IDRGGTFTDI VAKTPQGQFL TRKLLSENPT AYEDAALQGI RDFLNVEATA PIPNQLISSV KMGTTVATNA LLERKGEPTV LIITAGLRDV LEIGYQVRPK TFALNIEKPE VLYQDVIEVS ERFDDEGNEL VALCEETVRQ ELQQRYEAGF RSVAIVLMHA YKFPEHELRI AAIAKEIGFS QISTSHDVSP MVRIVPRGDT TVVDAYLSPI LRRYVQRVGA AIGAETGGGT SSKTSTGTDE NTAMVEAKSV SSDSKRLQFM RSSGGLTAAS KFQGRDAILS GPAGGIIGAV RTSELAGFNK IIGFDMGGTS TDVSHYAGDF ERAFETQVAG VRMSVPMMSV HTVAAGGGSI LHVDEQRFRV GPESAGAFPG PMSYRNGGPL TVTDANVCLG KVDPRFFPKL FGPQHNQAID DEAVKAAFAE IAQQQSTQSS PEHVAEGFLT IAIEHMAQAI KKISIERGYD VQQYALTCFG GAGGQHACLV ADRLGMQTIF IHPFASILSA YGMGLADIRS QRTETFQKVM DPSGLEALNA AFARLKAHTS KELKDQGIED AEQSHSATVF LRYQGTDTTL PISQATIDQM QQDFEAQHAA QYGFISPDKA IIVESISMES AGGGQYIDEP VYPLAESAVP DAQYTTQVFS GGAWHNTPIY SLAELLPGHQ VQGPAIIIED NGTVIVEPNW LASMTEHKHL VLKKRAVDAL ENSDTQNTPA VSHEKSDPVL VEIFNNQFMS IAEQMGIVLR NTSSSVNIKE RLDFSCAVFD VQGQLIANAP HIPVHLGSMD ATVKVLIQSG LSIEVGDVFI HNDPFNGGSH LPDVTVITPI FDQQKENVMF FVASRAHHAD IGGIAPGSMS PKAKTIIEEG VVIPCMKLVS KGRFLHDELQ ALMQGATYPV RNFNQNVADL QAQIGANRRG YQELLKLVDE HTLGVVNTYT QHIMDNAEES VRRTIDTLQG GEYRYEMDGG LHICVKVAVD HANRSASIDF TGTSPQQPNN FNAPGAITQA VVLYVFRCLV DSDIPLNAGC MRPLSILVPE GSMLNPVYPA AVVAGNVEVS QAATNALFGA LGTLGMSQGT MNNLTFGNAK YQYYETICSG APAVPGFDGA AAVHTHMTNS RLTDPEILES RYPVLLDKFI VRRGSGGKGQ WDAGDGIERR IRFLAQMQCA ILSGHREVPL AGVNGGDSGE LGHNWIERNG QKWLDLTGNG ETQVQVNDVV VIQTPTGGGF GSVFDKTTDK ATDKKTVDKK RVDKKRADKK TQGKKTDTTG QGE
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