| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3772 |
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| Symbol | |
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| ID | 4175552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4542488 |
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| End bp | 4543345 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056800 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_663326 |
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| Protein GI | 109900071 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGC TTAAAACAAA GAATATCGAT AACGCATATG CTGCAGGGGA CAATGCTGGT
AAATATCGAC AGACCCAGAG TGAGAAGGTC AAGTTGATAC CGGAACATGT GACACGAGCT
GATCTAAAAC AGGTGGAAAA AAACGGCTAT ATTGTCATCG AGAACGTGTT GTCGAGTGAC
GAAATTACGA CGGTTAAAAA TGCAATTTTG CCTTTGCTAA ATGAAACGGG TAGGAATTCA
TTCGAAGGAT ACAAAACACA AAGATTGTAC GGCGTTCTGA ACAAAACCAG AGCACTGGAC
CGCTTGGTTG ATCATCCGCG AATTCTTGCC TTACTCGACA AATTATTTAT GCCAAATTAT
CTCTTGTCCC AATTGCAGGT CATAAATTTG TTGCCGGGCG AATCTGGGCA GCCACTGCAC
TTCGATGATG GCTTTTACCC TATCTCTCGG CCTAGGGCAC CGTTAGGCGC CGCTACCATT
TGGGCAATTG ATGATTTCAC ACAGTCCAAT GGGGCAACTG TGATCGTGCC AAATAGCCAC
ACATGGGACG ACAACCAAAA GCCCACAGCA GAACAAGCGA AATCAGCAGT CATGAAAGCT
GGGTCTGTAC TCTTTTATCC CGGAACGTTT TGGCATGGTG GTGGTGCAAA CCATTCAAGT
GGTAACCGCC TTGCGGTTAC TTGCCAGTAC TGTGAGCCAT GGTTGCGTAC CCAAGAAAAC
TACTTTTTGG GTACGCCATT AAACGTAGTC GCGGATTTGT CAGAGGATAT ACGCAGAATG
TTAGGGTTTT CCATTCACCC TCCGTTTATT GGAATGGTCA ATGGCATGCA CCCTAAAAGA
CTATTAGAGA ATATGTGA
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| Protein sequence | MSTLKTKNID NAYAAGDNAG KYRQTQSEKV KLIPEHVTRA DLKQVEKNGY IVIENVLSSD
EITTVKNAIL PLLNETGRNS FEGYKTQRLY GVLNKTRALD RLVDHPRILA LLDKLFMPNY
LLSQLQVINL LPGESGQPLH FDDGFYPISR PRAPLGAATI WAIDDFTQSN GATVIVPNSH
TWDDNQKPTA EQAKSAVMKA GSVLFYPGTF WHGGGANHSS GNRLAVTCQY CEPWLRTQEN
YFLGTPLNVV ADLSEDIRRM LGFSIHPPFI GMVNGMHPKR LLENM
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