| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3753 |
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| Symbol | groEL |
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| ID | 4175533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4521858 |
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| End bp | 4523504 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056783 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_663309 |
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| Protein GI | 109900054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGAAGTACG TTTTTCTGAT GACGCTCGCG TAAAAATGCT AGCAGGCGTT
AACATTCTAG CTAACGCAGT AAAAGTTACC CTAGGTCCTA AAGGCCGTAA CGTAGTGTTA
GACAAGTCAT TCGGCGCACC TACCATCACT AAAGATGGTG TATCCGTAGC CAAAGAAATC
GAATTAGAAG ATAAATTCGA AAACATGGGC GCACAAATGG TGAAAGAAGT TGCTTCTAAA
GCCAATGACG AAGCTGGTGA CGGAACAACT ACCGCAACGG TACTTGCACA GTCTATCGTG
ACTGAAGGCC TGAAAGCCGT TGCAGCAGGT ATGAACCCAA TGGATCTTAA GCGCGGTATC
GACAAAGCAG TTATTGCTGC GGTTGAACAG CTTAAAACCC TTTCTGTTCC ATGTGCAGAC
AGCAAAGCGA TTGCCCAAGT AGGTACTATC TCTGCTAACT CTGACACTGA AGTAGGCGAC
CTTATCGCTG AAGCAATGGA CAAAGTAGGC AAAGAAGGCG TTATCACAGT TGAAGAAGGC
CAATCTCTAC AAAACGAACT AGAAGTGGTA GAAGGTATGC AGTTCGACCG TGGTTACCTA
TCTCCATACT TCATGAACAA CCAAGAAAAC GGCACTGTAG AACTAGACAG CCCGTTTATC
CTATTGGTTG ACAAAAAAGT ATCTAACATC CGTGAATTAC TACCGACCCT TGAAGCAGTA
GCAAAAGCCT CTAAGCCTTT GTTAATCATC GCTGAAGACG TTGAAGGTGA AGCACTTGCT
ACGCTAGTTG TGAACAACAT GCGCGGTATC GTTAAAGTGG CTGCTGTTAA AGCACCAGGT
TTCGGTGACC GTCGTAAAGC CATGCTCCAA GATCTTGCCA CCTTAACAGG CGGTACTGTG
ATTTCTGAAG AAATCGGTCT AGAGCTTGAA AAAGTGACCC TAGAAGATTT AGGCACAGCT
AAGCGTGTTG TTATCAACAA AGACAACACC ACAGTGGTTG ACGGTGCTGG CGAAGAAGAA
GCGATCCAAG GCCGTGTTGC TCAAATACGC GCTCAAATCG AAGAATCAAG CTCAGACTAC
GACAAAGAGA AGCTTCAAGA ACGTCTAGCT AAACTAGCTG GCGGTGTTGC GGTTATCAAA
GTTGGCGCAG CCACTGAAGT TGAAATGAAA GAGAAGAAAG ACCGCGTTGA AGATGCATTA
CACGCAACTC GCGCAGCGGT TGAAGAAGGC GTAGTTGCCG GTGGTGGTGT TGCACTAGTC
CGTGCCGCGT CTAAAATTGT TGACCTTCAA GGCGACAACG AAGACCAAAC ACACGGCATT
AAATTGCTAC TTCGCGCAAT GGAATCGCCA ATGCGTCAAA TCGCCGCTAA CGCCGGTGCA
GAAGCATCAG TAGTGACTAA CGCCGTTAAA AACGGCGCTG ACAACTACGG TTACAACGCA
GGTAACGACA CTTACGGCGA TATGCTAGAG ATGGGTATCC TTGACCCAAC TAAAGTAACG
CGTTCTGCAC TACAGTTCGC AGCATCAATC GCAAGTTTGA TGATCACAAC TGAAGCGATG
ATCGCTGAAG CACCGAAAGA AGATGCACCT GCAATGCCTG ATATGGGCGG CATGGGTGGT
ATGGGTGGAA TGGGCGGCAT GATGTAA
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| Protein sequence | MAAKEVRFSD DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASK ANDEAGDGTT TATVLAQSIV TEGLKAVAAG MNPMDLKRGI
DKAVIAAVEQ LKTLSVPCAD SKAIAQVGTI SANSDTEVGD LIAEAMDKVG KEGVITVEEG
QSLQNELEVV EGMQFDRGYL SPYFMNNQEN GTVELDSPFI LLVDKKVSNI RELLPTLEAV
AKASKPLLII AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DLATLTGGTV
ISEEIGLELE KVTLEDLGTA KRVVINKDNT TVVDGAGEEE AIQGRVAQIR AQIEESSSDY
DKEKLQERLA KLAGGVAVIK VGAATEVEMK EKKDRVEDAL HATRAAVEEG VVAGGGVALV
RAASKIVDLQ GDNEDQTHGI KLLLRAMESP MRQIAANAGA EASVVTNAVK NGADNYGYNA
GNDTYGDMLE MGILDPTKVT RSALQFAASI ASLMITTEAM IAEAPKEDAP AMPDMGGMGG
MGGMGGMM
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