| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3747 |
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| Symbol | |
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| ID | 4175527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4510002 |
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| End bp | 4512347 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056777 |
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| Product | aerobic respiration control sensor protein ArcB |
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| Protein accession | YP_663303 |
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| Protein GI | 109900048 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.244728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGAG AAGAATCAGT AGAACCTTGG GCCCTTCGAT TCGCCCAGTT TATCAACCGT
TTTGGCACCC TGCGTGTCAG CGTACTGTTC GTTATTCTGA CCCTAGTGTT TACCATGACC
GGTACGTATT TTTTGCGCAT TTACATTATT GGTGATGTAA AGCTCGAAGA CTTTATGAGT
GCGATTATTC TGACCATAGT CAGTGCCCCA TGGGTGTTAT TTTTCTTCAG TGAGTTGGTT
AAGCAGCTTG AGCGCTCCAG AGAGCACCTA TCGGACGCTG TGACACAACT TGAACGGCTT
CGCGAAGAAG ATATTTTGCT TAGCCGAGAG CTACAAAACA ATATTAAACA GCTAAATTAC
GAAATTGAGC AGCGTAAAAA TGCACAAGAA GAACGTGAAA ATGTATTTGT AGAGCTAGAG
AACGAAATTA AAGACAGAGC CGAAAAAGAA GAACAGGCTC TGCGTTTATC GACGTTATTA
CGCTCCATTA TCGATGCCTC GCCTGATTTA ATTTACTACC GCAATGAAGA AGGACAATTT
GCCGGTTGCA ACCGCGTCGC CGAGCAAATG ACCGGACTGA CTGAAGCTGA ATTAATTGGT
CTAACGCCGC ACGAGGTGTG GGAAGAAGAG TTGGCTCGCC AAGTGGCGGC GAGTGACCAA
GAAGTCTTAG AGAACGATGT CAGTATTACC GAAGAGATTT GGCTGCGCTT CGCCGATGGT
CGCCGTGGGT ATTTTGAAAT GCGCAAGGTA CCTTTTTATG ACAAAGACAA TAAACGCTTG
GGATTATTAG CGTTTGGACG TGATATTACT GAGCGTAAAC AAGCTGAGAA TATTGTGGCT
AAGGCGAGTA AAGATAAAAC TAAATTTATC GCCACGATCA GTCATGAATT GCGTACGCCT
TTAAACGGCA TCGTCGGTTT AAGTCGCATG CTGCGTGACA CCAAACTGGA TAAAGAACAA
TTTGCTTGGG TCAGTACGAT TTATGCTAGC GGTATTACGT TAGGTAACAT TTTCAATGAC
ATTATTGATA TTGACCGCAT GGGACGTGAC AAGCTTGAGC TGTCTTTAAA AACCGTATCT
ATCAAAGATT TTACAGAAGA ATTAAGCAGC ATTATTAAGT TACTTGCGGC AGATAAAGGC
CTTGCTTTTG ATACTGAGAT AAGAGAGCCG CTTCCTGATT TTGTCGAAGT TGATGGCACC
CGGTTACGTC AAATTCTGTG GAACTTACTG TTCAATGCGG TCAAGTTCAC GCAAAAAGGC
AAGGTCAGCC TGAGTGTGGA AGCGCAAACC TCAGGCGATG GTATCAGCCA TGTGACATTC
CGTGTGGGCG ATACCGGCGT GGGTATTCCG CAAACTGAGC TCGATAAAAT ATTCGCCATG
TATTACCAAG TGAACTTGCC TGAGCATCAA AGTGCCACGG GCACAGGGAT AGGTTTGGCT
ATCTGTCAGC AAATGGTGTC GCTGATGAAC GGTGAAATTA AAGTCAGCAG TGAAATAGGT
AAAGGTACGT GCTTCTCGGT GGAGTTACCC TTGCCCATTA GTAATCGCCC GATGCAAGTG
GAAGAGTTGC AAGTGCGTGG CCTGAATATC TTGTTGGTAG AGGATATAGA GCTCAATGTA
ATGGTCGCAA AAGCGCTTTT AGAAAAACTT GATCAGCATG TCGATGTGGC GATGACAGGT
GGCGAAGCGA TTAAAATGGT ACGCGATAAA CAATATGATT TGATTCTGCT TGATATTCAA
CTACCAGACA TGACGGGCTT TGATGTCGCA GCTACGTTGC ACGAAGAAAG CTTGGTGGAG
CAAACCAGTA TCGTCGCTTT GACAGCGAAT GTGATTAAGC GCCGTCAAGA ATACCTTGAT
AGCGGTATGG ATGACGTTAT TGCTAAGCCG GTTAAAAAGA GCCGAATCAT TGAAGTCTTT
AATTCACTCT TTAGTGAACA GCCGTATGAA TCCCACAAAC CCAAAGATGA AGAGCCTGAT
AAAGAGTTAG ACGCAATATT GGATTTGGAT TTACTGCAAA TGTTGGTGGA TACCATTGGC
CATGAAATGG TCAGCACCAG TGTTAAAGTG TTCGAAGAGA ATATGCCTGT TTATCTAGAT
ATTTTGCAGC TCAGCTTAAG TGCCAGTGAA AAAGATGAAG TGTGCTCCCA AGCCCATAAA
ATAAAAGGCG CAGCTGGGTC TGTTGGCTTG GCTAGAGTGC AGAAAATTGC CAACCAAATA
CAGCAGGGCG ACCACCCCGC ATGGTGGGAA AATGTGCATG ATTGGGTTGA AGAGCTGACC
TTTGCCGCCG AAGAAGATAT GAAAAAACTC GGTGACTGGC TAACTAAGCA AGATATAGAC
GATTAA
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| Protein sequence | MQREESVEPW ALRFAQFINR FGTLRVSVLF VILTLVFTMT GTYFLRIYII GDVKLEDFMS
AIILTIVSAP WVLFFFSELV KQLERSREHL SDAVTQLERL REEDILLSRE LQNNIKQLNY
EIEQRKNAQE ERENVFVELE NEIKDRAEKE EQALRLSTLL RSIIDASPDL IYYRNEEGQF
AGCNRVAEQM TGLTEAELIG LTPHEVWEEE LARQVAASDQ EVLENDVSIT EEIWLRFADG
RRGYFEMRKV PFYDKDNKRL GLLAFGRDIT ERKQAENIVA KASKDKTKFI ATISHELRTP
LNGIVGLSRM LRDTKLDKEQ FAWVSTIYAS GITLGNIFND IIDIDRMGRD KLELSLKTVS
IKDFTEELSS IIKLLAADKG LAFDTEIREP LPDFVEVDGT RLRQILWNLL FNAVKFTQKG
KVSLSVEAQT SGDGISHVTF RVGDTGVGIP QTELDKIFAM YYQVNLPEHQ SATGTGIGLA
ICQQMVSLMN GEIKVSSEIG KGTCFSVELP LPISNRPMQV EELQVRGLNI LLVEDIELNV
MVAKALLEKL DQHVDVAMTG GEAIKMVRDK QYDLILLDIQ LPDMTGFDVA ATLHEESLVE
QTSIVALTAN VIKRRQEYLD SGMDDVIAKP VKKSRIIEVF NSLFSEQPYE SHKPKDEEPD
KELDAILDLD LLQMLVDTIG HEMVSTSVKV FEENMPVYLD ILQLSLSASE KDEVCSQAHK
IKGAAGSVGL ARVQKIANQI QQGDHPAWWE NVHDWVEELT FAAEEDMKKL GDWLTKQDID
D
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