Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3692 |
Symbol | |
ID | 4175472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4456317 |
End bp | 4457162 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056722 |
Product | hypothetical protein |
Protein accession | YP_663248 |
Protein GI | 109899993 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAATT TCGGAAAGCT CTTCATCGTT CCTACTCCTA TCGGTAATTT AGAAGATATT ACTCTGCGCG CAATTCGTAC CTTAAATGAG GTGGATTTGA TTGCAGCAGA AGATACGCGC CATAGCCAAA AACTCATGCA GCACTTTGAT ATCTCTACAC GCTTAATTTC ATTACATGAT CACAACGAAA CTCAGCGGGC GGCACAATTA ATTGAAAAGT TGCAACAAGG TTTAAATATT GCGCTTATCT CTGATGCGGG CACACCGTTA ATTAGCGATC CGGGTTACGG ATTGGTGAAT CAATGTAGGG CAAACCGTGT TGATGTAATC CCTTTACCTG GTGCATGCGC GGCAGTCACA GCATTAAGTG GTGCGGGACT CGCTACCGAC AGATTTCGTT TCGAAGGCTT TTTGCCGGCC AAACAACAAG CAAAAATTCA AGCGCTAGAG TCAATTGAGC GTGAGACTGC TACCAGCGTA TTTTATGAAT CCCCGCGCAG AATTGCTGAT ACGGTGCAGG GCGTTGTTGA TGTGCTAGGG GCTGAACGCA AGGTGGTGGT AGCCAAAGAG CTGAGTAAGA CCTTCGAGAC CTTCTATTCA GGTACGGCAG GTGAAGCCCT TGAGTGGTTG CATGCGGATT CGAATCATCA ACGAGGTGAG TTCGTGCTGA TGATTGCGGG ACACAAATCT GATGTAAGCG ATATTCCAGA AGAGGCATTG AAGTTGCTTA AGTTATTGAT GGCTGAATTG CCACCCAAGA AAGCAGCTGC CATTGTTGCT CAGCAATATG GCTTAAAAAA GAATACCTTG TATCAAATTG GTTTAGAGTT TGGCAGTGAG TCATAA
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Protein sequence | MANFGKLFIV PTPIGNLEDI TLRAIRTLNE VDLIAAEDTR HSQKLMQHFD ISTRLISLHD HNETQRAAQL IEKLQQGLNI ALISDAGTPL ISDPGYGLVN QCRANRVDVI PLPGACAAVT ALSGAGLATD RFRFEGFLPA KQQAKIQALE SIERETATSV FYESPRRIAD TVQGVVDVLG AERKVVVAKE LSKTFETFYS GTAGEALEWL HADSNHQRGE FVLMIAGHKS DVSDIPEEAL KLLKLLMAEL PPKKAAAIVA QQYGLKKNTL YQIGLEFGSE S
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