Gene Patl_3684 details

Gene Information

• Locus tag: Patl_3684
• ID: 4175464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4444001
• End bp: 4444765
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638056714
• Product: hypothetical protein
• Protein accession: YP_663240
• Protein GI: 109899985

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACAC TTGTCGAATT AAGTAATACC GTACACAAAG ATTTAAAGCT TAAAGAAAAT 
AGCCTAGCGC AGTTTGCCGC CAGCCAGCAA ATTATGCGTC TTCGGGTGCC TGAGGTAGGC 
AAGGCTGCCA CTAATTTTCC GCTGTTTTTT TCACGTAATC AGCAAGATGG CAGTTGGGTG 
TTAACAGCAC TTAGCAGTTT TGAGCCGATG CAAAATTTGT TTGTTGATGA GGGGCGTTGG 
AATGCGATTT ATCAACCCAT CAGTTTACAA ACGTTTCCGT TTTATTTAAT GCAATCTCCC 
AAGGTAGAAA ATAGCTACAC CATAGGAATA TTGGAGAGCA GTGACGCTTT CTCTACTGAA 
GCGGGTGAAG CCATATTCGA TAGTGCCGGT AGAGCATCAT TGTATCTCAC TAAAGCGAAA 
AATTTATTAG AAGCAGGCAT TAAACAGGAC ATAGACACCC ATCGCTTTAT GCAAGAAACA 
GAATCGTTAG GTTTGATAAA AGCCATTGAT CTGCAATTGG TGTTTGAAGA TGGTAATACA 
CAGAATATCG CAGGTTTGTG CACAATCGAT GAGGACAAAC TGCATAGTCT AGCCGCTGAG 
AAAATAACGG TACTAAATGA CAGCGGTTAC CTAATCGCTA TTCATGCCAT GTTGCTGTCG 
ATTTATCAGT TAAATCTGTT ACTTCGAAAG CACAATGAAC GTAATACCCA CAATAAGATC 
ACTCAACTTA AAATCGAAGT AGCAAAAGAC AGAGTGGCGT CTTAA 

 

Protein sequence

MSTLVELSNT VHKDLKLKEN SLAQFAASQQ IMRLRVPEVG KAATNFPLFF SRNQQDGSWV 
LTALSSFEPM QNLFVDEGRW NAIYQPISLQ TFPFYLMQSP KVENSYTIGI LESSDAFSTE 
AGEAIFDSAG RASLYLTKAK NLLEAGIKQD IDTHRFMQET ESLGLIKAID LQLVFEDGNT 
QNIAGLCTID EDKLHSLAAE KITVLNDSGY LIAIHAMLLS IYQLNLLLRK HNERNTHNKI 
TQLKIEVAKD RVAS