Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3681 |
Symbol | |
ID | 4175461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4439677 |
End bp | 4440453 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638056711 |
Product | SapC |
Protein accession | YP_663237 |
Protein GI | 109899982 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATCA GCTACATCCC TCTTGATAAA GAGAAACATA AAGATCTAAA AATCAACCTT CAGCACGACT TCGGCTATGC AAAAGAAGCC CATATTGCTG CGGCATCAAT CCGTGAATAC GCTCAACTAG CTAGCGTAAT GCCGGTTGTT TTTGTAAAAG ATCCAAATTC TGAGAACTTC CATTCTGTGG CTATGTTGGG AACTGAAAAA GGCTCAAACC TTTTCGTTCA TGAAGGTAAA TGGCAAGTAC ATTGTCTGCC TATGAATATT CAACGTTACC CGTTTGACGT GCGTCCTGAT GGTGAGAAGT TAGGCGTATT CTTCGACGAA AACAGCGCAC TTATTACAGA CGACGGTGAG CCAGTTTTCA CCGCTGAAGG CGAGCCGAGC CCGTTTTTAG AAAACCGCCA GCAGTTGCTT TCTGAATTAG CAAACAGCGA AATGGCAACA CAACGTTTCA TTAAAAAATT GGTTGAGCTA GATTTACTCG ATCCAATCGA ATTATTAGTT AACTACGCTA ATGGCGAAAA GCGCAATATT ACTGGCATGT TCAGTGTGAG CGAAAAACGT CTGCAAGATC TTAGTGAAGA GCAAGTGGTT GAGCTACATA AAAGTGGTTT CCTAGGGGCA GCGTATGCAG TCCTTATGTC ACTTGGTCAG CTTAATCGTT TGGTTCACTT GTCGAACAAT ACGGACAAGG CGATTCAAAA CTTACAGTTG CGCGTAGGTG ATGCCATCAC TAAAGAGCAA GCGGCAGAGC AACCTGCAAA CGCTTAG
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Protein sequence | MTISYIPLDK EKHKDLKINL QHDFGYAKEA HIAAASIREY AQLASVMPVV FVKDPNSENF HSVAMLGTEK GSNLFVHEGK WQVHCLPMNI QRYPFDVRPD GEKLGVFFDE NSALITDDGE PVFTAEGEPS PFLENRQQLL SELANSEMAT QRFIKKLVEL DLLDPIELLV NYANGEKRNI TGMFSVSEKR LQDLSEEQVV ELHKSGFLGA AYAVLMSLGQ LNRLVHLSNN TDKAIQNLQL RVGDAITKEQ AAEQPANA
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