| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3671 |
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| Symbol | |
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| ID | 4175451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4427713 |
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| End bp | 4428546 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056701 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_663227 |
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| Protein GI | 109899972 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCAT TCGAAAATCA GTTGCAAACT TTCTACGATA AAGCGATCAC GCTTGGCACC
GAGTACGGCG GCCAACTTAT ATTAGCCATC GTTGTTTTAG TGGTTGGCCT GTGGGTAATA
GGTAAAGTCA GTAATGCCGT TAGGCGCCAC GCAGTTAAAG GGCTACCTGA TGAAACTCTC
GCCCAATTTT TGACTAATAT ATTTGAGGTC GTTCTCAAAG TACTTCTTGT CATTAGTGTG
GCATCAATGG TGGGTATCGA AACCACTTCA TTTGTGGCGA TATTGGGTGC CGCAGGTTTG
GCAGTCGGCT TCGCTCTGCA AGGCAGTTTA TCTAACTTCG CAGGCGGCGT GATGATCCTC
ATCTTCCGTC CTTTCAAAGT AGCGGATTAT GTTGGTGCGC AGGACGTTGA AGGGGTTATT
TTAGATATCG GTATTTTTGT TACCACATTT GAAACGTTTG ATAAGCGCAT CATCATTGTA
CCAAACGGGC CTTTAGCCAA TGGCAATATT ACTAATTACA CCGCTAGCAG CATAAGAGCA
GTGGAAATAT CTATCGGTAT CTCATATTCA GATGATATCG CCAAAGGTAA AGAAGCGATG
GAACAAGCCA TCATGAACGA CCCCCGCGTT CTCAAAGAAG AAGGCAATGT GGTCGCTGTG
GTCGACTTAG GATCGAGTTC GGTTGACTTC TTAGTGCGTG CATTCGTTAA AACGGATGAC
TACTGGTCAC TGTTTTTTGA TATACGCCCG ATGCTTAAAT CTGCTGTAGA AGAAGTGGGC
TTAACCATTC CATTCCCTCA GCGAGATGTG CATATCATTC AAGAAAACAG TTAA
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| Protein sequence | MDSFENQLQT FYDKAITLGT EYGGQLILAI VVLVVGLWVI GKVSNAVRRH AVKGLPDETL
AQFLTNIFEV VLKVLLVISV ASMVGIETTS FVAILGAAGL AVGFALQGSL SNFAGGVMIL
IFRPFKVADY VGAQDVEGVI LDIGIFVTTF ETFDKRIIIV PNGPLANGNI TNYTASSIRA
VEISIGISYS DDIAKGKEAM EQAIMNDPRV LKEEGNVVAV VDLGSSSVDF LVRAFVKTDD
YWSLFFDIRP MLKSAVEEVG LTIPFPQRDV HIIQENS
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