| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3646 |
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| Symbol | |
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| ID | 4175426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4393404 |
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| End bp | 4394525 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056676 |
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| Product | phosphomannose isomerase-like |
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| Protein accession | YP_663202 |
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| Protein GI | 109899947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1482] Phosphomannose isomerase |
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| TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCAA CTCTCATTTC CGATACTAGT CATGGAAATA ATCTTATGAG TCAGATTTTT
AAATTCAATG CCAATCGTGT GTGGCGTACC TATCAAGGCG GTAAGCTGCT AGATACTATC
GAAGGAAAAG AGCCCCCCGA AGATTCTAGC TTTCCAGAAG ACTGGATTGG CTCCACGGTT
GAAGCGCGAA ACGTCGGCCG CGAGCACATT TCTGAAGGGC TAGCCATGGT CACTGGTGAC
GACGGGCAGA CGGTGCCTTT TCGAGATTTA CTGACCCAAA ACAAGGACTA TTTTTTGGGT
AAAACGGGTG ACACTGAGCG TACGCTTGAG GATATTCCGC TGGTTAAGTA CCTCGATAGC
GCCACGCGAT TGCATTTTCA GGCGCATCCC ACACGGCAAT TTGCCCAAGA GCGTTTGGGT
TTACCAAGAG GCAAAACAGA GGCTTACGTT ATTCTACAAA CCCGCGAAGA TGTCAGTGAG
CCTTATATTT ACGCGGGCTT TCAGCGGCCG CCTAGTCGCG CTCAGTTAAA AGAGTGGATA
GAAAACCAAG ATATTAAATC AATTGAAAGC TGTTTCGATC CCATTCCCGT CAAGCCGGGG
GATGTGTTTT TGCTTCCCGG AGGCCGCCCC CATGCGCTGG GCGAGGGCAT TCTGATGTTG
GAGATAATGG AGCCTTCTGA TCTGGCGGTC AGATTTGAGT TTGAGCGCTG CGGATATGTT
ATCCCCGAGC AAGCGAGGTT CATGGATCGG GGAATTGAGA CCGCATTAGA TGTGTTTGAT
TTTAGCCCAG TACCAGCTGA GCAAGTTGAT GCTGAATTTC GTTGTCACCC CAAGGTGCTT
AGCACTGATG AGCAAGGTAA TACGTTAGAA GAGCTGATCG GTGCTAAGGA TACCTCTTGT
TTTACCGTTA GGCGTGCCAC CGTGAAAAGT ACGTTCAAGC GCAATGAAGA GGCCTTTTTC
TATGGCGTGG TAACACAAGG CGCGGGTACA TTGCGTATTG GTGATGACGT AACAAAGTTA
AAACAGTGGG AGCGCTTTTT CTGCCCTGCG GGAGTGACGG AGTTTGAGTA CGAATCGGCA
TCAGGTTTGT CGATTTTAGA GTGCTATCCC GGTAACACAT AG
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| Protein sequence | MRSTLISDTS HGNNLMSQIF KFNANRVWRT YQGGKLLDTI EGKEPPEDSS FPEDWIGSTV
EARNVGREHI SEGLAMVTGD DGQTVPFRDL LTQNKDYFLG KTGDTERTLE DIPLVKYLDS
ATRLHFQAHP TRQFAQERLG LPRGKTEAYV ILQTREDVSE PYIYAGFQRP PSRAQLKEWI
ENQDIKSIES CFDPIPVKPG DVFLLPGGRP HALGEGILML EIMEPSDLAV RFEFERCGYV
IPEQARFMDR GIETALDVFD FSPVPAEQVD AEFRCHPKVL STDEQGNTLE ELIGAKDTSC
FTVRRATVKS TFKRNEEAFF YGVVTQGAGT LRIGDDVTKL KQWERFFCPA GVTEFEYESA
SGLSILECYP GNT
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