Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3622 |
Symbol | |
ID | 4175402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4359823 |
End bp | 4360776 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056652 |
Product | transaldolase B |
Protein accession | YP_663178 |
Protein GI | 109899923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.517107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATC AATTACAAGC ACTACGCGAT ATCACCACTG TTGTTGCCGA TACTGGCGAC ATAGAAGCGA TCAAAAAGTA TCAACCCGTT GATGCGACGA CCAACCCTTC ATTGTTGCTT AAAGCGGCTG AGATGGAGCA ATATCGCTCG CATCTTGAAA ATGCGGTTGC TTGGGCAAAA GAGCAATCTG ATGACGCTGA CCAGCAGATC ATTGATGCTG GTGACAAGCT AGCGGTGACC ATAGGGACTG ATATTGTGAA TATCGTTCCT GGTCGTATTT CTACAGAAGT AGATGCCCGT TTGTCGTTTG ACACGCAAGC CAGCATCGAA AAAGCGCACA AGCTTATCGC TTTGTATAAA GAAGCAGGCA TAGATAAAAG CCGCATCTTA ATTAAATTAG CGTCAACATG GGAAGGTATT AAAGCCGCAG AACACCTTGA AAAAGAAGGT ATCAATTGTA ACTTAACCTT GTTGTTTAGT TTCGCTCAAG CCCAAGCCTG TGCTGAAGCC GGTGCTTACC TAATTTCACC CTTCGTTGGC CGTATACTTG ATTGGTATAA AGCCAAAACC GGTAAAACTG AATATGCAGC CAGTGAAGAT CCTGGTGTGC AATCAGTGAC TAAGATCTAC AATTACTACA AAGAGCACGG CTATAAAACC GTCGTTATGG GCGCAAGCTT CCGTAATATC GGTGAAATTA CCGAACTTGC TGGCTGTGAC CGCTTGACCA TCAGCCCGGG TTTGTTGGAA GAGTTATCTA ACAGCGATGC CCCGCTTGAA GTGAAGCTGA AAGACACGGG AGCAACAACG ACTCCTGGTA AGCCACTTGA TGAAGCTGCA TTCCGCTGGG AAATGAACCA AGATGCCATG GCAACTGAGA AGTTGTCTGA AGGTATTCGT AACTTTGCGG CAGACCAAGT GAAACTTGAA ACGCTACTTA AAAGCTACGT GTAA
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Protein sequence | MSNQLQALRD ITTVVADTGD IEAIKKYQPV DATTNPSLLL KAAEMEQYRS HLENAVAWAK EQSDDADQQI IDAGDKLAVT IGTDIVNIVP GRISTEVDAR LSFDTQASIE KAHKLIALYK EAGIDKSRIL IKLASTWEGI KAAEHLEKEG INCNLTLLFS FAQAQACAEA GAYLISPFVG RILDWYKAKT GKTEYAASED PGVQSVTKIY NYYKEHGYKT VVMGASFRNI GEITELAGCD RLTISPGLLE ELSNSDAPLE VKLKDTGATT TPGKPLDEAA FRWEMNQDAM ATEKLSEGIR NFAADQVKLE TLLKSYV
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