| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3579 |
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| Symbol | |
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| ID | 4175359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4303085 |
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| End bp | 4304080 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056609 |
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| Product | homoserine kinase |
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| Protein accession | YP_663135 |
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| Protein GI | 109899880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT TAAATGACAT GATGGGTAAA ACGCTGCGCG CTTTTGCCCC AGCTTCAACA
GGTAATGTTA GCTTAGGCTT TGATTTGCTA GGCGCTGCGT TGAAGCCCGT TGACGGCACA
GTGCTTGGGG ATGAGGTTGA CCTTGAATTG GCTGACGAGT TTAGCCTTGC GGTAGAAGGT
GCTTTTGCTC ATAAATTACC AGCGGATCCT GACACCAACA TAGTGACCCG TTGCTATCAA
CACTTTGTAA AAGTGATGAG CGAAAAGGGC GTCGAGCTGC CGCCAGTCAA AATGACCTTA
CATAAACATT TGCCTATTGG CAGTGGTTTA GGGTCAAGTG CGGCATCGGT TGTGGCCGCA
CTGCATGGTT TAAATGAATT TTACGGCCAG TTATTGGGCG AGGTGCCATT TAACCAACAT
GAATTGCTGC TTATTATGGG CGAATTGGAA GGTCAGATCA GTGGCAGTGT ACATTATGAT
AATGTCGCAC CCTGTTACTT AGGTGGCTTG ACCTTAATGG CAGAACAAGC CGATACGCTT
GCCTTACAAT TGCCAACGTT CAAACATTGG TATTGGGTGG CGTGTTATTC AGGTATTACG
GTATCAACCG CAGCGGCAAG AGATATTTTG CCGAAGCAGG TGTCTATGCC AAATACGTTG
AAATTTGGCC GTCAGTTGGC TGTTTTTGTG GATGCGCTTT ATCGCCAAGA CGAGAAGCTC
GCGGTGAGTA TGATGACGGA TGTTATCGCA GAACCTTATC GCAAATCTTT ATTGCCGCAC
TTTGATGAGT CACGTGAGTT TGCGATGCAA AATGGCGCTA TGGCGTTTGG TATTTCAGGA
TCTGGGCCGA CCGTATTTGC CGTGTGCGAC AACCTTGAAC AGGCGCAAAC CATCAGTTCG
TGGTTGCAAG AGAATTATAT CCAAAATGAC ACCGGCTTTA GCCATGTGTG TCAGCTTGAT
GAACAAGGTG CTGTGGCAAA AGACATCAGC GCCTAG
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| Protein sequence | MSELNDMMGK TLRAFAPAST GNVSLGFDLL GAALKPVDGT VLGDEVDLEL ADEFSLAVEG
AFAHKLPADP DTNIVTRCYQ HFVKVMSEKG VELPPVKMTL HKHLPIGSGL GSSAASVVAA
LHGLNEFYGQ LLGEVPFNQH ELLLIMGELE GQISGSVHYD NVAPCYLGGL TLMAEQADTL
ALQLPTFKHW YWVACYSGIT VSTAAARDIL PKQVSMPNTL KFGRQLAVFV DALYRQDEKL
AVSMMTDVIA EPYRKSLLPH FDESREFAMQ NGAMAFGISG SGPTVFAVCD NLEQAQTISS
WLQENYIQND TGFSHVCQLD EQGAVAKDIS A
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