| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3560 |
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| Symbol | |
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| ID | 4175340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4279352 |
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| End bp | 4280413 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056590 |
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| Product | permease YjgP/YjgQ |
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| Protein accession | YP_663116 |
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| Protein GI | 109899861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0179004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA TCCTCGACTG GTACATCGCT CGTACGCTAC TCAGCACCAC AGCCATGAGC
TTAGGTGTAT TGGTTGGCCT AAGCGCATTA ATCAAATTCA TCGAACAGAT GAAAAGCGTT
GGCAGAGGCA GTTACGATAT GACTGTTGCC GCTGTTTACG TATTCTTAAG TTTACCCCGT
GAGCTTGAGC AGTTTTTCCC TATGGCTACT TTGATTGGTG GCTTAATTGG CATGGGTATT
TTAGCCAGCA ACAGTGAATT GGTAGTGATG CAATCGGCAG GGCAAAGTCG CTGGAACATT
ATTATATCCG CCATGAAGTC GGCCATTTTA ATGGTGTTAT TTGTAATGGT CATTGGCGAG
TGGGTTGCCC CGGTCAGTGA GACCAAAGCC AAAGAAATTC GCACCCAAGC AATATCGGGC
GGTAGTTTGT TCTCATCTGA CAGATTAGTG TGGGCTAAAG ACGGTGATAA CTTCGTGAGT
ATCGGCGAAG TGGTTGATAA AGATACTCTG CGGGATGTGA GTATTTACGA GTTCGATAAC
GAATTGTATT TGCGCCAAAT TACCACCGCA GAAAGCGCTA CGTATCAAGA CAAAACATGG
GAGTTGAGCC ATGTTCAATC TACTGAGTTT TCCGATAACC GCATTCAAGT ACAAGACGCG
GCTGACGGGG CATGGGCTTC GTCATTAACG CCAGATAAAT TAGGTGTGGT CACAGTGAAG
CCTGAAGCAC TGTCCATCCG TGGGTTGATT GATTATGTGA ATTACTTAGA GAACAACAGC
CAAAACTCTG AGCGATACCG TTTGGCATTA TGGCGTAAAG TGCTGCAACC GATTTCGGTT
GGGGTCATGT TATTGATGGC CTTGTCGTTT ATTTTTGGGC CACTGCGCAG TGTGACCATG
GGGGCCCGAG TGATAATGGG GGTGCTGACG GGATTTGGCT TTTTCGTCAG TAATGAAGTG
TTCGGTTCAT TAAGTACTGT GTACCACATA CCGCCTTTTA TCGGTGCTAT TTTGCCAAGT
GTGGTATTTA CCGGTATATC GATCCATCTT TTGCGCCGCT AG
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| Protein sequence | MIKILDWYIA RTLLSTTAMS LGVLVGLSAL IKFIEQMKSV GRGSYDMTVA AVYVFLSLPR
ELEQFFPMAT LIGGLIGMGI LASNSELVVM QSAGQSRWNI IISAMKSAIL MVLFVMVIGE
WVAPVSETKA KEIRTQAISG GSLFSSDRLV WAKDGDNFVS IGEVVDKDTL RDVSIYEFDN
ELYLRQITTA ESATYQDKTW ELSHVQSTEF SDNRIQVQDA ADGAWASSLT PDKLGVVTVK
PEALSIRGLI DYVNYLENNS QNSERYRLAL WRKVLQPISV GVMLLMALSF IFGPLRSVTM
GARVIMGVLT GFGFFVSNEV FGSLSTVYHI PPFIGAILPS VVFTGISIHL LRR
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