| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3544 |
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| Symbol | |
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| ID | 4175323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4258041 |
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| End bp | 4260176 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056573 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_663100 |
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| Protein GI | 109899845 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA AATTTAATAA GCAGCGAGCA GTACTGCTAG CGGGAATGGT GTGCTTTAGC
GCTTTCGCAA CAGCGGGCTT AAAAGTTAGC AGCTTAGTTA ACGACATCAA ATCTACTGTT
GAGCCAGGTT CACTCGGAAC TTCACAATTA GTTAAAACCG TTAATAGTTT AGTGGGTCTG
AATAATGAAG TGATTATTCA GGGGGCTGAA ATCAGTATCT TAACTGAAGT GATTAATACG
CTTGGCGGCG TGATAACACA TGAATTGCCC CTCATAAACG GGATTGGCGT TCGGGTAAGT
GACGCACAGC TAGTTTTGCT GAATCAGTTG ACTGACATTA TTACTATCAA AAAGAACGAA
GCCGTTTATA CATCCAGCGC ATTGGATCAC TGTTTAGTAT ATGGAAGTCA CGTAGCAGAG
CTAACCAATA GAAGTATTCG CTGGAACTTG TATAACGCCC GTGACATGGA AGCTAACATG
CAAAGCATGT CTTTCAAATG GCCTGAAGAG CTGGGACATA TCTATTCTGT AAAAGTGAAC
GGTGCCACTG TTTACTGGCG CTTGTACAGC AAGAAGACTG GTGAACTGTC GATTGATATT
AAGCGACTCA AACGTTTTGC CAAACTAGAT TCGTTCGAAG GCGTAACGGT TGAAGTATCT
TTTGCCAAAA AAGGCGTGAA AAATTACCAA CAACGTGATT TTTCTTTGGA TGTTCAATTC
AAAGAGGGTT GTGATCGCAG CCTAGTGAAG GGGTACGACA CCCAAGCAAA TGAAGGTGAT
AGCAACAGTT ATTATGTGAA TAACATTGGT GCTGACGAAC TACATGATCG TGGCATTACA
GGTAAAGACG TTACCGTTGC TGTTATCGAC AGCGGCCTAT GGGCTGCGCA TAGCGCGTTA
GGGAATGACA CGGCGAATAA TACACGTATT AAAGCGGCAT ATGATGCTTT AGAAGATACG
GAACTGAACG TGAGTAATCT TACTGATGAA AACAGCCACG GAACTCACAT TACAGGCATC
ATTGCCAATA GTGACCGTGC GGTCGTAGAC GGCCAAATGC GCAGTTATTA TCAAGGTGTT
GCACCGGACG CAAACCTAGT GGTCGTAAAA GCCTTTTACG AAGACGGTCA TAGTACTTAC
TTAGACGCAT TACGCGGCCT ACAGTACATA GCTGATAACC ATGAAGCGTT AAATATAAGG
GTAGTAAACC TTTCCTTTGG TGCGCCGCCT CGTTCAAATT ACTGGGATGA TCCCATTAAC
CAAGCGGTAA TGGCATTATG GGAAAAAGAC GTCATTGTGG TGACATCAGC GGGCAATACA
GGCCCAAGTG CAATGACCAT TGGCGTACCT GCAAACGTAC CTTACGTAAT AAGCGTGGGG
GCAATCAGCG ATAATTACAC TCAGGACAAT GCAAATGATG ACACCTTGCT TTCGTTCTCA
TCTCAGGGCC CAACTCACGA GGCCTTTATA AAGCCTGATA TGGTGGCACC TGGCGGCCAT
ATGTTTAGCT TAGCGAACGA AGACATGTAT GTGCCTGCTA AATACCCTCA GTATATGGTT
GGTAAAGACC GCTTTATCAT GTCCGGTACG TCACAAGCTT CAGGTGTGGT CAGTGGCGTA
GTCGCGTTAA TGTTACAAGA CGATCCAAGT CTCAGTGCGA ACGATGTGAA ATGTCGCTTG
ATGACCAGTA CGACTATGGC TCAAGTGAAT GGCAAACTGG CTTACAGCCC ATTTCAACAG
GGCTCAGGCA GTGTTAATGC AATAAAAGCC GTAGATTCCA ATGAATCAGG TTGTGCGAAT
AATGGCATGG ACATAGCGGC CGATATTAGT GGCGACCAAC ATTATATGGG CGCAGCTCGA
AAAGATGAAA ACGGCAACTA CTACATTCAA GGGTTTGAGT TTGAAGTTTG GGAAGAAGCC
TTCATGTGGG AAGAAGCTTT CATGTGGGAA GAAGCCTTCA TGTGGGAAGA AGCTTTCATG
TGGGAAGAAG CCTTCATGTG GGAAGAAGCT TTCATGTGGG AAGAAGCTTT CATGTGGGAA
GAAGCCTTCA TGTGGGAAGA AGCTTTCATG TGGGAAGAAG CCTTCATGTG GGAAGAAGCA
CACATGAACC AAGAAAACTT CATGCTGCAA GAATAA
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| Protein sequence | MKPKFNKQRA VLLAGMVCFS AFATAGLKVS SLVNDIKSTV EPGSLGTSQL VKTVNSLVGL
NNEVIIQGAE ISILTEVINT LGGVITHELP LINGIGVRVS DAQLVLLNQL TDIITIKKNE
AVYTSSALDH CLVYGSHVAE LTNRSIRWNL YNARDMEANM QSMSFKWPEE LGHIYSVKVN
GATVYWRLYS KKTGELSIDI KRLKRFAKLD SFEGVTVEVS FAKKGVKNYQ QRDFSLDVQF
KEGCDRSLVK GYDTQANEGD SNSYYVNNIG ADELHDRGIT GKDVTVAVID SGLWAAHSAL
GNDTANNTRI KAAYDALEDT ELNVSNLTDE NSHGTHITGI IANSDRAVVD GQMRSYYQGV
APDANLVVVK AFYEDGHSTY LDALRGLQYI ADNHEALNIR VVNLSFGAPP RSNYWDDPIN
QAVMALWEKD VIVVTSAGNT GPSAMTIGVP ANVPYVISVG AISDNYTQDN ANDDTLLSFS
SQGPTHEAFI KPDMVAPGGH MFSLANEDMY VPAKYPQYMV GKDRFIMSGT SQASGVVSGV
VALMLQDDPS LSANDVKCRL MTSTTMAQVN GKLAYSPFQQ GSGSVNAIKA VDSNESGCAN
NGMDIAADIS GDQHYMGAAR KDENGNYYIQ GFEFEVWEEA FMWEEAFMWE EAFMWEEAFM
WEEAFMWEEA FMWEEAFMWE EAFMWEEAFM WEEAFMWEEA HMNQENFMLQ E
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