| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3538 |
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| Symbol | |
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| ID | 4175317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4245144 |
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| End bp | 4245653 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056567 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_663094 |
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| Protein GI | 109899839 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGAT ATGCCGTTTC AGGTGACCAA GGCGTATTAA CCAAACTCTA TGATGATTGT
GGAGACGATT TATATCACTT TCTGCTGACA TTATCGGACA GCACCTTGGC AAGAGATATC
AGTCAAAAGA CGTGGCTCAA GGTTATTGAG AAAAGACATT TATATCAGGA CACAGGGCTT
TTTAAAGCCT GGTTATTTAC CTTGGCGCGA AACCTGTTGA TTGACGAGTA TCGCGAAACA
AAACGTTTGG TGTACGAAAG TGCGCCAATC GATAGGGCTG CTGCTCCTGC TATCACATCA
TGCTCACTGC TAGCGCGCTT TGATGGAGCG TTGAATTCGT TAGCGTTTGT GCAGCGAGAA
GCTTTTTGTT TACAACAAGA AGGGTTCAGC ATGCAAGAAA TTGCGCAAAT CACCCACTGC
GGTCAGGAAA CCGTTAAGAG TCGACTGCGT TATGCCAAAG CATCGCTGCG CGAGCAATTG
AAAGAGGGGT TAGGACACAA GCATGTCTGA
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| Protein sequence | MRRYAVSGDQ GVLTKLYDDC GDDLYHFLLT LSDSTLARDI SQKTWLKVIE KRHLYQDTGL
FKAWLFTLAR NLLIDEYRET KRLVYESAPI DRAAAPAITS CSLLARFDGA LNSLAFVQRE
AFCLQQEGFS MQEIAQITHC GQETVKSRLR YAKASLREQL KEGLGHKHV
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