Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3534 |
Symbol | |
ID | 4175313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4241314 |
End bp | 4242396 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056563 |
Product | aldose 1-epimerase |
Protein accession | YP_663090 |
Protein GI | 109899835 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAC ATCGTCTTTT TGGGACGCTG CCTGACGGAC AGAAAGTCAC TGAATACAGC TTGCGAAATA AAGTCGGAAT GCAGGTAGAT ATTCTTGATT TGGGCGGCAT CATTCGTCGC TGGTTAGTGC CAGATGCAGA ACCGTTAAAA TCAGATGCGC CGCAGGCACC AGTGGATATC GTGCTTGGCT TCGATACTCT CGAAGATTAT ATCGCTGACC AAGCTTACGT AGGGGCACTT GTTGGGCGCT ACGCAAACCG TATCGCCAAA GGACATTTCG CTTTAAACGA TGTAAATTAT CAGTTAGATG TGAATCAAGG TGGTAACAGC TTACATGGCG GTTTTGAAGG GTTTAATCGC CGAGTTTGGC AAGCGCAAAC ACTAGATAAT GACGCTGAAG CCTCCTTGAT GCTAACGCTT ACCAGTGACG ATGGCGATCA AGGCTTTCCC GGTCGATTAG AAGTCAATGT GACTTACACT TTGCATGAAA CGGGTTTGAA AATAACCTAC CGCGCAAAAG CAGCGCAAGA CACGGTGTTC AATCCTACCC AACACAGTTA CTTTAACTTA GCCGGACATA ACAGCGGCTC CATTGAAGAT CATCAAGTGC AAATTTTGGC CAGTCATTAC ACCCCAACCG ATGAGAACGC TATCCCCACG GGGGAATTGG TTGATGTAAA TAACACGCCG TTTGACTTGC GTGAAATGAC GACACTTAAG AGCCCATTGC AGTCCAGCCA TAAGCAGATA AAACTTGGTA ATGGCTTTGA TCACAACTGG TGCTTAGATG CTTACCAAGC CAAGATGAAT GCGCCAGAGC TGGTCGCTAA GGCTTTCGAG CCAAAAAGTC GGCGCACTAT GCGTGTTTTG ACCACTATGC CTGGCATGCA GCTTTACACA GCAAATTACG TTGGACCAGA GCCCATTGGA AAAGGCGCAA CAGAGTATCA AGGCAAACAA GCATACTGCT TTGAAACGCA GTTCTACCCA GACTCACCTA ATCAAAGTCA TTTCCCCAGC GCCACGCTTA AGGCCAATGA AGAGCATTAC TCGGTGACCG AATATCGTTT ATCCTTTTCG TAG
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Protein sequence | MIKHRLFGTL PDGQKVTEYS LRNKVGMQVD ILDLGGIIRR WLVPDAEPLK SDAPQAPVDI VLGFDTLEDY IADQAYVGAL VGRYANRIAK GHFALNDVNY QLDVNQGGNS LHGGFEGFNR RVWQAQTLDN DAEASLMLTL TSDDGDQGFP GRLEVNVTYT LHETGLKITY RAKAAQDTVF NPTQHSYFNL AGHNSGSIED HQVQILASHY TPTDENAIPT GELVDVNNTP FDLREMTTLK SPLQSSHKQI KLGNGFDHNW CLDAYQAKMN APELVAKAFE PKSRRTMRVL TTMPGMQLYT ANYVGPEPIG KGATEYQGKQ AYCFETQFYP DSPNQSHFPS ATLKANEEHY SVTEYRLSFS
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