| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3511 |
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| Symbol | |
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| ID | 4175290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4213670 |
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| End bp | 4216399 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056540 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_663067 |
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| Protein GI | 109899812 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00666871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCGA GTATTCTGAC CAAGGTTTTT GGTAGCCGTA ATGACCGAAC TTTAAAAAAA
TTAAATAAAA TTACTGAGCA AGTTAACCAG CTAGAAGCAC AGTATGAGGC GCTGAGTGAT
GAGCAACTCA AAGCTAAGAC GGGTGAGTTT CAAAAGCGTT TGCAAGACGG TGAAGACACA
GACAATTTAT TGCCTGAAGC GTTCGCTGTT GTACGTGAAG CCAGTAAGCG TGTGTTTTCA
ATGCGTCATT TCGATGTACA GATGCTTGGT GGTCAAGTGT TGCACACAGG TCAAATCGCT
GAAATGCGTA CCGGTGAAGG TAAAACCCTT ACCTCTACAC TACCTGCCTA CTTAAACGCT
TTAAGTGGTA AGGGTGTGCA CGTGATTACC GTCAACGATT ATTTGGCGAG TCGTGATGCT
GAGGGCAGCC GTCCACTATT TGAATTCTTA GGGTTGAGTG TTGGCTGTAA TATCCCTGGC
ATGAACCATG CCCAGAAAAA AGAAGCCTAC GCTGCTGATA TTACTTACGG CACTAACAAT
GAATTCGGTT TTGATTACCT GCGTGACAAC ATGGCCTTTA GCCCTGGTGA TCGTGTTCAG
CGCGAACTGC ATTACGCCAT CATTGATGAA GTAGATTCAA TCCTTATTGA TGAAGCCAGA
ACGCCGCTGA TTATTTCCGG TCAAGCGGAA GACAGCTCTG AGCTATATCG TAAAATTAAT
GCCATTATTC CTCAGCTTGA ACAGCAAGAA AAAGAAGACG AAGAAGGCAA AAATGGCGAC
GGTGACTACA CTATCGACGA AAAAGGTAAA CAGGTACATT TGACTGAAAA AGGTCAAATT
CATGTTGAAG AGATCCTTAA AACCAGCGGT ATCCTCGGGG AAGATGAATC TCTTTTCGCT
GCGGCTAATA TTTCGTTGTT GCACCATGTG AATGCGGCAC TACGTGCGCA TAAATTGTTT
AGCCGTGACG TTGATTACAT CGTCAAAGGT GATGACGTAG TTATCGTTGA TGAGCACACT
GGCCGCACAA TGGAAGGTCG TCGTTGGTCT GAAGGTTTAC ACCAGGCAGT AGAAGCCAAA
GAAGGTGTAA ATATTCAAAA CGAGAACCAA ACACTCGCGT CAATCACCTT CCAAAATTAC
TTTCGTTTGT ATGACAAGCT TGCAGGTATG ACAGGTACAG CGGATACCGA AGCGTTTGAA
TTTCAAAGTA TTTACGGCTT AGATACCGTA GTTATTCCAA CGAATAAGCC TATGGTCCGT
AAAGATAAAG CCGACTTAAT ATACTTAACC GCCCAAGAGA AATACGAAGC GATTGTTGAA
GATATTAAAG ATTGCGTTAA GCGTGGCCAG CCGACATTAG TCGGTACAGT ATCTATTGAA
AACTCTGAGC TTATTTCCAA TATATTGAAA AAAGCAAAAA TTCCTCACAA GGTATTGAAT
GCGAAATTCC ATGAGCAGGA AGCTGACATC GTTGCACAAG CGGGTAAGCC CGGTGCCGTG
ACGATTGCTA CTAACATGGC TGGTCGTGGT ACGGATATTG TTCTTGGTGG TAACTGGCAA
GTAGCCGTTG ATGGTATTAA CGATCCTAAG CCTGGCACAG TGGAGAAAAT CAAAGAGCAA
TGGCAAAAAG ATCACGATGC AGTAATTGAG GCCGGTGGTT TACACATCAT AGGCACAGAG
CGTCACGAAT CTCGCCGTAT CGATAACCAG CTTCGTGGTC GTTCAGGCCG TCAAGGTGAT
GCGGGGTCTT CGCGTTTTTA CTTGTCGCTC GATGATGCCT TAATGCGTAT CTTTGCCTCT
GAAAAAATGG GCAACATGAT GAAGCGTCTA GGTATGGAGC GCGGTGAAGC CATTGAACAT
CCTTGGGTTA CGCGTGCAAT CGAAAATGCA CAACGTAAAG TGGAAGGTCG TAACTTCGAC
ATGCGTAAGC AGTTACTTGA GTTTGATGAT GTGGCAAACG ATCAGCGTAA GGTCATTTAC
GAGCAGCGTA ATGAGCTACT TGATGAAGGC GATATTTATT CGACCATCGA AGCCATTCGC
ATCGATGTAG TAGATAGCAT TATCAGCCAA TACATTCCGC CGCAATCACT GAGCGAAATG
TGGAATGTTA GCGGATTAGA AGAGCACTTT AAAAGTGAGT TTTTATTGGA TATTCCATTA
CAAAAATGGA TCGATGAAGA CGACAAATTA TACGAAGAGA AAATCCGCGA GCGCATTTTA
GAAGAAGTGA ATAACGCTTA TAAAGCGAAA GAAGACATTG TTGGTCCTGA CGTGCTTCGC
CAGTTTGAAA AAGCGGTGAT GTTGCAAAAC TTGGACAGTC ATTGGAAAGA GCATTTGGCG
GCAATGGATC ATTTACGCCA AGGCATTCAT TTGCGTGGTT ATGCTCAGAA AAATCCGAAG
CAAGAATATA AGCGCGAATC GTTCGAACTG TTCACTGAAA TGTTAGAAGC ATTGAAAGTA
GAAGTGGTTA CTGTACTAAG TAAAGTACAA GTGAAGGCGG AATCTGATGT TGAAGCCGTT
GAAGAGCAGC GTCGTCAAGC GGACGAACAA CCTAAACAGT ACGAGCATGA AACTGCTAGT
GCGACACAGG CGCCTGAACA AGCACCAGAA GCAGCGCCTG CTGCACGTCC GGGCAATGCA
CTGCGCGATG GCCCCAAAGT AGGTCGTAAT GATCCGTGTC CATGTGGTTC AGGGCTTAAA
TATAAACAAT GCCATGGTAA ATTAAGCTAG
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| Protein sequence | MFSSILTKVF GSRNDRTLKK LNKITEQVNQ LEAQYEALSD EQLKAKTGEF QKRLQDGEDT
DNLLPEAFAV VREASKRVFS MRHFDVQMLG GQVLHTGQIA EMRTGEGKTL TSTLPAYLNA
LSGKGVHVIT VNDYLASRDA EGSRPLFEFL GLSVGCNIPG MNHAQKKEAY AADITYGTNN
EFGFDYLRDN MAFSPGDRVQ RELHYAIIDE VDSILIDEAR TPLIISGQAE DSSELYRKIN
AIIPQLEQQE KEDEEGKNGD GDYTIDEKGK QVHLTEKGQI HVEEILKTSG ILGEDESLFA
AANISLLHHV NAALRAHKLF SRDVDYIVKG DDVVIVDEHT GRTMEGRRWS EGLHQAVEAK
EGVNIQNENQ TLASITFQNY FRLYDKLAGM TGTADTEAFE FQSIYGLDTV VIPTNKPMVR
KDKADLIYLT AQEKYEAIVE DIKDCVKRGQ PTLVGTVSIE NSELISNILK KAKIPHKVLN
AKFHEQEADI VAQAGKPGAV TIATNMAGRG TDIVLGGNWQ VAVDGINDPK PGTVEKIKEQ
WQKDHDAVIE AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSL DDALMRIFAS
EKMGNMMKRL GMERGEAIEH PWVTRAIENA QRKVEGRNFD MRKQLLEFDD VANDQRKVIY
EQRNELLDEG DIYSTIEAIR IDVVDSIISQ YIPPQSLSEM WNVSGLEEHF KSEFLLDIPL
QKWIDEDDKL YEEKIRERIL EEVNNAYKAK EDIVGPDVLR QFEKAVMLQN LDSHWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FTEMLEALKV EVVTVLSKVQ VKAESDVEAV
EEQRRQADEQ PKQYEHETAS ATQAPEQAPE AAPAARPGNA LRDGPKVGRN DPCPCGSGLK
YKQCHGKLS
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