| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3501 |
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| Symbol | |
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| ID | 4175280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4204304 |
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| End bp | 4205530 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056530 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_663057 |
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| Protein GI | 109899802 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGTT ATGATGTGGT TATCGTCGGT GGCGGAATAG TCGGTTTAAC CGTTGCGCTC
ACATTGGCGA GCGGTGAGCT TAACGTAGCG ATTATTGATG CGCAATCAGG TGACACCGCA
CTTGGCGATA AACCTGAGCT ACGAGTCAGC ACTTTTACCC TAGCGACCCA AACCGTAATG
CAAAATTTAG GCGTTTGGCC TTTACTGGCG CAAGAGCGGC TATGCGCTTA TGAGCACATG
TCGGTGTGGG ATCAAGACAG TTTCGCCCAT ATTGGTTTTT CCCATAGCGA GGTAAAACAA
GATTATCTTG GTCATGTAGT AGAAAATCAA AATTTAGCGC TAGCGCTGTG GGCGAAGGCA
GAGCAAAGCC CTTGCATCAC GGTTCTGGCG CCAAACAAAG TCAGTAAAAT GGTATTTGGC
CAACAAGAAA GCTTCTTAAC CCTAGATGAT GACACCATGC TAACGGCTAG GCTGGTGGTC
GGTGCTGATG GTGCTAACTC CATGGTGCGG CAAAAAGCCA ATTTGCCGTT AACATTTTGG
GATTACGAAC ATCATTCGAT TGTTGCCACA ATTAAAACCG AATTGCCTCA CGATAATACT
GCTAGGCAGG TGTTTACCCC GAAAGGACCG TTAGCCTTTT TACCTTTGTG GGATGCGCAT
CATTGTTCAA TTGTTTGGTC TCAGCAGGAG CCTGCCGCCA CCGCATTACT CGCGTTAGAT
GATACCGCCT TTGAAAAAGC GCTTATGGCT GCGTTTGATA TGCGTTTAGG CATATGTGAA
TTAGTCAGTG AGCGCAAGAG CTTCCCGTTA AAAATGCGGT ACGCGCGCCA ATGGGTAACC
GATAGAGTAG CATTGGTTGG CGATGCCGCA CACACTATTC ACCCCTTAGC GGGTCAAGGT
GCAAACCTAG GGATAATGGA TGGGGTGGCC TTAGCCGAAC AGGTGATCAA AATAGCTGAG
CAAGGTAAGG ATATTGGTTT AACCAAAAAC TTACGTGAAT ATGAGCGCTG GCGCAAAACT
GAAGCGGTGA AAATGATTGC GACCATGGAG TCATTCAAAC GCTTATTTGA TGGGGCAAAC
CCAGTGCGAA AGTGGGTGCG TGACGTCGGC CTTAGCACCA TGAACCACTT GCCCAAAGCA
AAACAGAAAA TTGTTCAGCA CGCGGTTGGA CTCGGTGGTG AACTGCCCCA CCTAGCGCAG
AATAAACTGA CAAGGAAGGC GTCTTAG
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| Protein sequence | MQSYDVVIVG GGIVGLTVAL TLASGELNVA IIDAQSGDTA LGDKPELRVS TFTLATQTVM
QNLGVWPLLA QERLCAYEHM SVWDQDSFAH IGFSHSEVKQ DYLGHVVENQ NLALALWAKA
EQSPCITVLA PNKVSKMVFG QQESFLTLDD DTMLTARLVV GADGANSMVR QKANLPLTFW
DYEHHSIVAT IKTELPHDNT ARQVFTPKGP LAFLPLWDAH HCSIVWSQQE PAATALLALD
DTAFEKALMA AFDMRLGICE LVSERKSFPL KMRYARQWVT DRVALVGDAA HTIHPLAGQG
ANLGIMDGVA LAEQVIKIAE QGKDIGLTKN LREYERWRKT EAVKMIATME SFKRLFDGAN
PVRKWVRDVG LSTMNHLPKA KQKIVQHAVG LGGELPHLAQ NKLTRKAS
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