| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3477 |
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| Symbol | |
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| ID | 4175254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4175011 |
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| End bp | 4176312 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056504 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_663033 |
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| Protein GI | 109899778 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTT CCCGTTCAAC AGCAAAAGCA GACACTCCCA TTCCAGAGAG TTTCGAATCT
TGTTTTATCC ATTCTTTGGA GCGCCATTGC GCCACAATTT CGTTTAATAC AGATGGCATG
ATCCTAGATG CAAATTCGCT TTTTTTAAGC ACAGTTGGCT ATTCTTTAGC CGAAATTAAA
GGGCAACATC ACCGCATGTT TTGTAGTGCG ATGGAATCAG GTTCGCCTGA GTATCGCTCG
TTTTGGGCAA ATCTTGCACA AGGGGAAAGT GCAAGCGGCA CATTTTTACG CAAGCGCAAG
GACGGCGCAG ATATATGGCT TGAAGCCACG TATTTCCCAG TAGAACAAAA CGGGAAAATA
GTACGTATTG TCAAAATAGC CAATGACATC ACGGTTGAAA AAGAGCACTT AAATAGTCAG
ACCGCTATTT TTGAAGCCCT CAACCGCTCC AGTGCCTTAA TTGAGTTCAC GCCACAAGGC
GAGATCATCA GCGCGAATGA AAACTTTATT CACACCATGG GCTACGCAAG TGAAAAAGAC
ATTGTAGGTA AACATCACCG CATGTTTTGT ACAGAAGACT TCTACCAAGA AAATCCCAAC
TTTTGGCGCG AACTAGAACA AGGTACATTT AAAGGTGGGC AGTTTAATCG CCTCACTCGA
GATGGCAGCA CTATATGGCT AGAAGCCACT TACAACCCTG TGTTGAATGC GCAAGGTCAA
GTCATCAAGG TTGTTAAGAT TGCATCCGAC ATCACTTCTC GCATTCAAAA GCAACTGGCG
ACACAGGAAG CCGCAGAGAT AGCCTACAGC ACATCCATGC AGACCGCTAA GATATCCAAA
GATGGCGCAG TGATCTTGCA ACGCACAGTT GACACATCGA ATGCCATCGT AACCAGTACA
TTGACTTCCA CTGATTTAAT TGAGCAATTA AATAAACGCT CAGAGGAAAT ATCAAAAATA
GTAACGACCA TTAGTTCAAT CGCTGATCAA ACCAACCTAC TGGCTCTTAA TGCGGCTATC
GAAGCAGCCA GAGCAGGCGA ATACGGTAGA GGTTTTGCGG TGGTGGCAGA TGAAGTACGC
ACGCTGGCGG CGCGCACTGT GAGTTCAACT GCAGGTATTG AGCAACTGGT AACAAACAAC
AGTGCCCTGA CTCAAAAAGC GAAAGACAGC ATCGGCGACA TTCATCAGCA GTCTTTGCAA
AGTGCCAAGC AAGTTGAAGA AGCAGCGACG ATCATCGAAG AAGTGCTAAC AGGGGCGAAA
TACGTCAGTG AAACAGTAGA TCAGTTACGA AGTGAGAGCT AA
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| Protein sequence | MFFSRSTAKA DTPIPESFES CFIHSLERHC ATISFNTDGM ILDANSLFLS TVGYSLAEIK
GQHHRMFCSA MESGSPEYRS FWANLAQGES ASGTFLRKRK DGADIWLEAT YFPVEQNGKI
VRIVKIANDI TVEKEHLNSQ TAIFEALNRS SALIEFTPQG EIISANENFI HTMGYASEKD
IVGKHHRMFC TEDFYQENPN FWRELEQGTF KGGQFNRLTR DGSTIWLEAT YNPVLNAQGQ
VIKVVKIASD ITSRIQKQLA TQEAAEIAYS TSMQTAKISK DGAVILQRTV DTSNAIVTST
LTSTDLIEQL NKRSEEISKI VTTISSIADQ TNLLALNAAI EAARAGEYGR GFAVVADEVR
TLAARTVSST AGIEQLVTNN SALTQKAKDS IGDIHQQSLQ SAKQVEEAAT IIEEVLTGAK
YVSETVDQLR SES
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