| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3476 |
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| Symbol | |
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| ID | 4175253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4173723 |
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| End bp | 4174688 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056503 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_663032 |
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| Protein GI | 109899777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.907089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA TGAAATTTAT CCGTTATCTA GTTTTAGCCT CTGGCTTGCT ATTACCTTTT
AGTGCTTTTA ATCAAGCAGT TGCACAACAA AATTCGGTTG ATAAATTTGC CCCAGGTTTC
TATCGCACTC AGCTTGGTCA GTTCGATATT ATCGCCCTTA ATGATGGCAC CGTTGATTTG
CCTATGGATG CATTACTGCA TCAAGACAGC AATACGACAA AGCAACAATT AGAAGCGGCA
TTTTTATCAG TACCAACGGA AACCTCAGTC AACGGTTATT TGATTGATAC GGGTGATGAA
CTTGTACTCA TCGATGCAGG TGCGGGTAAC TTGTTTGGCC CCACATTGGG AAACATTACA
AAAAGCCTAG GTGCAGCGGG ATACTCCCCG AGCGATGTTG ATCACATATT GATCACTCAC
TTACATCCTG ACCACGTTGG TGGTTTATCA AAAGACGGTC AGCGAGTGTT TCCCAATGCT
ACGGTTCATG CGAACCAACG GGACATTGAT TTTTGGTTAA GCGATAAGGA AATGAGTAAG
GCGCCAGAGG CGAATAAAGG TTTTTTCCAA GGCGCGATGG CGTCTTTAAA TCCTTACGTG
AAAGCCAATA AGATCAGTGC ATTTGACGCT AGCGAGCAAA TTGTAAAAGG GATTAAGACT
GATGCGACTC ACGGTCACAC GCCAGGGCAC ACATCTTATC TTGTGCAAAA TGATGGTGAG
GAAATGTGGG TTATTGGCGA TCTTATTCAT GCAGGGGCAG TACAATTCCC ACATCCAGAG
GTCACCATTG ATTTCGACTC AGCTCCTGAG CAGGCTAAAA AACAGCGTGA ACGGATTTTT
TCTCTCGTTG CTAAGAGTAA AGCGCTGATG GCGGGGGCGC ATTTGCAATT CCCGGGATTG
GGTCATGTGC GTGAAACGAA AAGCGGTTTT GAATGGGTAC CTGCGAATTA TCGCCGCTTA
CATTAG
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| Protein sequence | MKVMKFIRYL VLASGLLLPF SAFNQAVAQQ NSVDKFAPGF YRTQLGQFDI IALNDGTVDL
PMDALLHQDS NTTKQQLEAA FLSVPTETSV NGYLIDTGDE LVLIDAGAGN LFGPTLGNIT
KSLGAAGYSP SDVDHILITH LHPDHVGGLS KDGQRVFPNA TVHANQRDID FWLSDKEMSK
APEANKGFFQ GAMASLNPYV KANKISAFDA SEQIVKGIKT DATHGHTPGH TSYLVQNDGE
EMWVIGDLIH AGAVQFPHPE VTIDFDSAPE QAKKQRERIF SLVAKSKALM AGAHLQFPGL
GHVRETKSGF EWVPANYRRL H
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