Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3468 |
Symbol | |
ID | 4175245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4162182 |
End bp | 4163303 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638056495 |
Product | hypothetical protein |
Protein accession | YP_663024 |
Protein GI | 109899769 |
COG category | [S] Function unknown |
COG ID | [COG3535] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGT TAACCCGGTT AGACATATCA GACATATTAC ATGGCTGCGC AGTACTTGGC ACCGGTGGCG GTGGTGAGCT CAGCGAAGGT TTTCGCTATA TTGAAGCCGC CTTTGCTGAG GGTAAAACCT TCACCTTGGT AGACATCGAT GAAGTCCCAG ACGGTGAAAA GCTATGTACA CCTTATATGC TAGGTGCGCT AACCGCTATT TCTGGGGAAG AAGAGCAAGA ATATGCCGCT CTGCCAAGAG CAAGCGGTAT TCCCATGTTA GCAGCCTATG AGCGCCTACA AGCCCTGACG GGTGATGATT ATTACGGCAC TATTTGCTGT GAACTCGGTG GCTCCAATAC GGCTATCTCC TTTTATCTAG CCGCCATGAC AGACGGTTAC ATTATTGATG CCGACCCCGC TGGGCGCGCC GTACCCGAAA TCACTCACTC AACCTATTAT TTCAATGGTT TGCCTGCCGC GCCTATCGTG ACGGCTAATG AATTTGGTGA GTGCTTTATC TGTGAAAACG TTGCAGATGA CCAACGCGCT GAGCGTGTTG TGCGCGCCCT TGCTATGGTG AGTCGCAATG ACATTGCAGC GATAGATCAC GCTTTACCTG TGGAACAGCT TCGCGGTGCA GTGATTCCTG GCACCATCAG CAAAGCCTTA AACGTCGGTC AAGCTATTCG CTTAGCGGTT CAAGAACAAG ATGACATTGC CGATGCCATC GCCGATTGCG CCGGTGGCTA TGTGGCGTTT CGCGGCAACG TTAGCCAGTT TCATTTTGAG ACCAAAGATG GATTCACCTT AGGCACTATC GACATTCAAG GCCACAGCCA GTACCAAGGC TCGACGTATG CTATTGATGT AAAGAATGAA AACATGGCGG CGCGTTTAAA TGGCGTAGTA GATGTAACCA TTCCTGATCT GATTTGTGTA CTGGACGTGG ATAACAATGT ACCTGTGACT AATCCTTATC ACAAAGTCGG GGCTAATTTG GCAGTCGTCA TTTTACCTGC GCCGAAGGAG TTCACTGGCG AGAAAGGTCT TTCGGTATTC GGTCCTGCGT ACGCAGGGAT TGATCAAGCG TACGAATGCG CGGTGAGTAA GCATTTCGCT CAGCTTAAAT AA
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Protein sequence | MKQLTRLDIS DILHGCAVLG TGGGGELSEG FRYIEAAFAE GKTFTLVDID EVPDGEKLCT PYMLGALTAI SGEEEQEYAA LPRASGIPML AAYERLQALT GDDYYGTICC ELGGSNTAIS FYLAAMTDGY IIDADPAGRA VPEITHSTYY FNGLPAAPIV TANEFGECFI CENVADDQRA ERVVRALAMV SRNDIAAIDH ALPVEQLRGA VIPGTISKAL NVGQAIRLAV QEQDDIADAI ADCAGGYVAF RGNVSQFHFE TKDGFTLGTI DIQGHSQYQG STYAIDVKNE NMAARLNGVV DVTIPDLICV LDVDNNVPVT NPYHKVGANL AVVILPAPKE FTGEKGLSVF GPAYAGIDQA YECAVSKHFA QLK
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