| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3424 |
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| Symbol | |
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| ID | 4175201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4101210 |
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| End bp | 4103234 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056455 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_662984 |
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| Protein GI | 109899729 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.560716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA CTGTAGCACT GCGCGTTGTA GGTGGGTTTG CCATTATTAC TTCGCTGCTT
ATCGTCATGG GAATATTTTC ACTCGCTACC TTAGATGATA TAGATGACGC TACCGAAGAC
GTAAGTAATC TCGCTTTTCC GACGGTCAGC GGCAGTAGTC AACTCAAAGT GTCATTCTTA
AACATGGGGC GCCTAACGGC AGAAGCCTAC TACGGTGACG GTTTAGACAG CCTTGATGAA
AAAAGCGAAG CCTTTAACAA TAGCCAAAGC AACTTTGAAA ACGAATTCAA CACACTTAAG
CAGGTAGTCA GCCAAGAGTC TGACTTAAAA GCCTCTTTAG CAGAAGTGGA TGGCATTTAC
GAAGACTATA AGGTCAATGT CTTAAAGCTG TTTGATAGCC GTAAAGCTGA CCTTGCTATG
CGCGATACAC TGCGTGGTCA AATTGGCGAT ATTGAAGATA ACGCCGATGA CACATCCTCA
TTGATCTTAG ATTTCTCTGA CCTTGACGAA GTTCAAAATA ATGCCCAACT TGCCAAGGCT
TCAGAATTAG CCAATCGCCT TGAAACCAAT TTAATGTCAC TTATCACAGT GAGCTCAGAA
TATATTAAAA CCCAAAATTT GGTTAGGGCT GACACCCTAG GCAACGAGGT AGAACTGGTT
GTAAACCAAA TTCGTGAATC TTTGAGTGGC ATTCAAAACG CAGCGGGTGG CAACGACCCT
AGTGGTACCC TGTCCGAAAT CTATCAGTTG ACGGGGTCAG TCCTAGACTT GGTAAGCTCG
TCAACGGGTG TGCTACAAAA CCAAGTAAAG AAGATCAACA AACAGAATGA AGCCACTGCC
GCTTACAGGG CCTCAGATGC CAACATCGAG TTAGCCATTA CCAAACTTAA TACTCTGTCT
AAACTTGCCG ATGATAAAGC ATCGATAGCC AATGAATCGG TCAAAAGCTC AATTAGCTCT
GGCAATCTAC GAACCACATT TATTGTTATT ATCTCGGTCT TAATTGCCAG CGTAATTGCC
TTCTTTGGTG TGCGAGCTAT TATCAAGCCG CTTAACAGAG TTAATGAGAT GCTGAACATT
GTTTCATCAG GGGATCTTAC TCAACGTTTA GACGACTCTT CCGATGATGA ATTTGGCACT
TTGGCGAAAA ACTGTAATAA CTTGGTTGAC AGCTTAAAGT CATTGATTTC AGGTATAGGC
TCTCGCTCTG CTCAGTTAGC TGCCGCATCA GAAGAGACCT CTGCGGTGAC CATGCAAACC
ACCACATCGA TTCAAGAGCA GAAATCACAG ATCGCGCAAG TTGCTACCGC AACAACAGAA
ATGCACAGTA CGTCCTTGGT TGTCAGTCAA AGCGCTGAAG ATACATTGCG TCAAATTCAA
CATGCTGATG AAGAAGCCGA GAAGGTTAAA GCTATCTCGG AAGAAAACAT TCGCACCATT
GAAGTGCTCG CCCGTGACGT TGAAGAAGCG GCCGAGGTTA TTAATAAGCT TCATCAAGAC
AGTGCCAGCA TCGGCGGTAT TTTGGATGTT ATTCGTGGCG TGGCTGACCA AACTAACTTA
CTCGCATTAA ACGCGGCCAT TGAAGCGGCG CGCGCAGGTG AGCATGGTAG AGGCTTTGCC
GTAGTAGCAG ATGAAGTACG TACCCTTGCC AGTCGCACAC AAAAATCGAC TCAAGAAATT
AACTCGATGA TTGAAGTGCT TCAAGCGGGT GCTGAAAAAG CCGTAGCAGT AATGAACCAA
GGCAAAGAGC AAACAACCGT TTGTGTTGAG AAAACCGAAG CCTCAACCAA AGCCTTGCAG
CTCATTTCTG ATGCCGTTCA TAAAGCGTAC GATGTTAGTT CGCAAATCGC TCAAGCAGCG
AAAGAACAAA ATGTGGTGTC GCAAGAAATC AGCGAGAAGC TAGAGAATAT CGTGAATATC
GCCGAAGAAA CCTCTGTAGG CGCGCATCAA ACGTCTGAAT CAAGTCACGA GGTGGCCAAG
CTTGCTGAAG AGCTACAAAG TTCTGTACAG CAGTTTAAGG TCTAA
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| Protein sequence | MKLTVALRVV GGFAIITSLL IVMGIFSLAT LDDIDDATED VSNLAFPTVS GSSQLKVSFL
NMGRLTAEAY YGDGLDSLDE KSEAFNNSQS NFENEFNTLK QVVSQESDLK ASLAEVDGIY
EDYKVNVLKL FDSRKADLAM RDTLRGQIGD IEDNADDTSS LILDFSDLDE VQNNAQLAKA
SELANRLETN LMSLITVSSE YIKTQNLVRA DTLGNEVELV VNQIRESLSG IQNAAGGNDP
SGTLSEIYQL TGSVLDLVSS STGVLQNQVK KINKQNEATA AYRASDANIE LAITKLNTLS
KLADDKASIA NESVKSSISS GNLRTTFIVI ISVLIASVIA FFGVRAIIKP LNRVNEMLNI
VSSGDLTQRL DDSSDDEFGT LAKNCNNLVD SLKSLISGIG SRSAQLAAAS EETSAVTMQT
TTSIQEQKSQ IAQVATATTE MHSTSLVVSQ SAEDTLRQIQ HADEEAEKVK AISEENIRTI
EVLARDVEEA AEVINKLHQD SASIGGILDV IRGVADQTNL LALNAAIEAA RAGEHGRGFA
VVADEVRTLA SRTQKSTQEI NSMIEVLQAG AEKAVAVMNQ GKEQTTVCVE KTEASTKALQ
LISDAVHKAY DVSSQIAQAA KEQNVVSQEI SEKLENIVNI AEETSVGAHQ TSESSHEVAK
LAEELQSSVQ QFKV
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