| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3420 |
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| Symbol | |
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| ID | 4175197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4097813 |
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| End bp | 4098793 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056451 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_662980 |
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| Protein GI | 109899725 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.303537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATTA AGCTTGCCAT AACACCGGGC GAACCAGCAG GGGTTGGCCC AGATTTAATC
ATCACCTTAG CGCAGCAGCA ATGGCAGGCC ATGTTAGTGG TATTTGCCAA TGCTGAGCTG
ATGCGTACCC GTGCAAATGA ACTGAATATC CCACTGACGT TATTACCATA CGATGCAAGC
CGCACGGACA TTCAACCTGC AGGGTCGCTT TATATTGTTG ATATACCGCT GCAAGATGAA
GTCATTGCTG GAAAACTAAA TCCAACGAAC AGCCAATACG TACTAGATAC ACTGCACCAA
GCTTGCCAGA TGAATCTCAA TGGCGAATTT CAGGCTCTGG TGACAGGTCC TGTGCATAAA
GGCGTGATAA ACGAGGCAGG CATTCCCTTT AGTGGCCACA CTGAATTTTT TGCCCAGCAG
TCGAACACCC CTGAAGTTGT GATGATGCTG GCCACCGAAG GCTTGCGCGT AACACTCGCT
ACGACGCACA TTCCAGTGAC AGCGGTATCT GCTGCTATTA CTCAGCCCAA GCTGGATAAC
GTGATCCGTA TCATAGATCA CGATCTAAGA ACCAAGTTCG GCATTGCTAA GCCGCATATT
TTTGTATGTG GGCTCAATCC TCATGCAGGT GAAGACGGGC ATATTGGCCG TGAGGAGATA
GATACGATCA TTCCTGCCCT TAACGCTTTG CGCCAAGAGG GCATAACGCT TACCGGGCCG
TTACCGGCTG ACACTATTTT TAATCCAAAG TATTTGCAAC AAGCCGATAC CGTGCTTGCT
ATGTATCATG ATCAAGGGCT ACCTGTGTTA AAATACAAGG GCTTTAGTCA AGCGGTAAAC
ATCACGTTGG GATTACCCTT TATCCGCACC TCCGTGGACC ACGGAACCGC ACTCGATTTA
GCCGCTACCG GCCAAGCCGA TGTTGGCAGT TTTAGCATCG CTATCAAGGA AGCCATTTCA
TTGGCAAAAA GTACACAATG A
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| Protein sequence | MTIKLAITPG EPAGVGPDLI ITLAQQQWQA MLVVFANAEL MRTRANELNI PLTLLPYDAS
RTDIQPAGSL YIVDIPLQDE VIAGKLNPTN SQYVLDTLHQ ACQMNLNGEF QALVTGPVHK
GVINEAGIPF SGHTEFFAQQ SNTPEVVMML ATEGLRVTLA TTHIPVTAVS AAITQPKLDN
VIRIIDHDLR TKFGIAKPHI FVCGLNPHAG EDGHIGREEI DTIIPALNAL RQEGITLTGP
LPADTIFNPK YLQQADTVLA MYHDQGLPVL KYKGFSQAVN ITLGLPFIRT SVDHGTALDL
AATGQADVGS FSIAIKEAIS LAKSTQ
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