Gene Patl_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3353 
Symbol 
ID4175130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4020808 
End bp4022889 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content45% 
IMG OID638056384 
Productendothelin-converting protein 1 
Protein accessionYP_662913 
Protein GI109899658 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000120839 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TATCTTTAGT AGCAATGAGT GTATGCATTG CATTGGGTTT GAGCGCTTGT 
AGTCCTAGCC CTGAAAAAGA GTCAGAAACA AAACAAGAAA TCACAAAAGT CGCTGAGAAA
AAGGCTCCTG AATTATCAGG TATCGACTTA ACGGCAATTG ATAAAACCGT TCGTCCTCAA
GACGACTTGT TTCGTTACGT AAATGGTACA TGGCTTGAAA CCACAGAGAT TCCAGGAGAT
AAGTCTCGTT ATGGTGTATT CAACGTGTTA TATGATGATA CCCAAGATCA TCTTAAAACC
ATCATCCAAG AAGCTGCTGA CAGCAACGCC AAGAAAGGCA CCAATACGCA AAAATTAGGC
GACATGTATA ACAGTTACAT GAACGTTGAA TTAGCCAACT CCTTAGGCCT TTCACCACTT
AAAGCTGAGC TTGATAGTAT TAACGATATC AGAGATATGA AGCAAATATC GGCTAAATTT
GGTGAGCTTT ACACTAAAGG TATTGGCGGG ATCTTCAACT TCTATGTGTC ACCTGATGCC
AAGAAACCTG AAGTTGTTGG TATGTACTTA GTGCAAGGCG GCTTGACCTT GCCTGATCGT
GACTATTACA GTAAAGACGA AGAAAAATTC GTTAACTTCC GTAATGCAAC GCAAACATAC
ATGGCAGCTC TACTAGAAAA AGCTGGCGTA AGTGATCCTG AGCAAGCCGC TTCAGAGTTA
ATGGATTTAG AAAAAGACAT AGCCTCCAAG CACATCTCGC GCGTAGAAAG CCGTGATGCA
GAAAAAAACT ACAACAAACG CAGCGCGCAA GAAGTAACCA GCTTAATGGG CGGTAGCTTT
GACTGGCAGG CTTATGCTGC TGCTAGCGGT ATCAGCAGTG TGGATGAAAT TATCGTGCGC
AACATGCCTT ACTTTGAAGC CGTAGGCGAG ATATACGCAA ACCATGACGT GCAAGTTTGG
AAGAACTATC TCACTTACAA TTTGCTCGAT GCTTACGCCT CTCGTTTAGA TGAAGAACTG
GTTAACCTAC ATTTCGATTT CCACTCAAAG ACGTTGAACG GTATTCCTGA GCAGCAACCT
CGCTGGAAAC GTGCAGTTGC CGCAACCAGT GGCGTATTAG GTGAAGTACT CGGCCAGCAA
TACGTTGAAC GTCACTTTAC CCCAGAAGCA AAAGCAAAAA TGGATGAGTT AGTTAAAAAC
TTGACCAAAG CGTACGGTGA AAGCATCGAT CAACTCGATT GGATGACGCC TGAAACGAAA
AAGGCTGCCC GTGAAAAGCT TGCTAAGTTT ACCCCAAAAA TCGGCTACCC TGATAAGTGG
TTGAACTACG ATGATCTAAC CATTGCCGCA GACGACTTAG TCGGCAACTA TCTGCGTTAT
TTCGAATTCG ATCACGCAGT AGATGTAGCT AAAATTGGCA AACCCGTCGA TAAAGCAGAT
TGGGGCATGA CACCGCAGAC AATCAATGCT TACTACAGCC CGGTACGCAA CGAAATCGTG
TTCCCTGCAG GCATATTGCA ATCACCGTTT TTTGATATGA CCGCTGATGA TGCTGTTAAT
TACGGCGCTA TAGGAGCGGT AATTGGCCAT GAAATTGGCC ATGGTTTTGA CGACCAAGGC
TCAAAGTACG ATGGCGAAGG TAACTTGCGT AGCTGGTGGA GTGATGAAGA TCGCGCCGCA
TTCGATGTGC TTGGTAAAAA GCTTGTGGCC CAATTTGACG CTTACGAACC CATCCCAGGT
CAGCACGTAA ACGGTGAGTT GACTTTAGGT GAAAACATTG GCGATTTAGC CGGTGTGACT
ATCGGCTACA AAGCCTATCA CATGTCACTT GGTGATAAAG AAGGCAAGGT CATTGACGGC
CTAACCGGTG ACCAGCGCTT CTTTATGGGA TATGCCCAAG TATGGCGTAG CAAAATGCGT
GAAGATGCTT TACGTGCTCG CTTGCTTAGT GACCCACACT CACCTGGCGA ATACCGTGTA
AACGGCATAG TAGGTAACGT TGATGCTTTC TATGAGGCCT TTGACGTTAA AGAAGGTGAT
AACATGTATC TGAAGCCTGA AGACCGCGTT AAAATCTGGT AA
 
Protein sequence
MKKLSLVAMS VCIALGLSAC SPSPEKESET KQEITKVAEK KAPELSGIDL TAIDKTVRPQ 
DDLFRYVNGT WLETTEIPGD KSRYGVFNVL YDDTQDHLKT IIQEAADSNA KKGTNTQKLG
DMYNSYMNVE LANSLGLSPL KAELDSINDI RDMKQISAKF GELYTKGIGG IFNFYVSPDA
KKPEVVGMYL VQGGLTLPDR DYYSKDEEKF VNFRNATQTY MAALLEKAGV SDPEQAASEL
MDLEKDIASK HISRVESRDA EKNYNKRSAQ EVTSLMGGSF DWQAYAAASG ISSVDEIIVR
NMPYFEAVGE IYANHDVQVW KNYLTYNLLD AYASRLDEEL VNLHFDFHSK TLNGIPEQQP
RWKRAVAATS GVLGEVLGQQ YVERHFTPEA KAKMDELVKN LTKAYGESID QLDWMTPETK
KAAREKLAKF TPKIGYPDKW LNYDDLTIAA DDLVGNYLRY FEFDHAVDVA KIGKPVDKAD
WGMTPQTINA YYSPVRNEIV FPAGILQSPF FDMTADDAVN YGAIGAVIGH EIGHGFDDQG
SKYDGEGNLR SWWSDEDRAA FDVLGKKLVA QFDAYEPIPG QHVNGELTLG ENIGDLAGVT
IGYKAYHMSL GDKEGKVIDG LTGDQRFFMG YAQVWRSKMR EDALRARLLS DPHSPGEYRV
NGIVGNVDAF YEAFDVKEGD NMYLKPEDRV KIW