| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3350 |
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| Symbol | aceE |
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| ID | 4175127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4014241 |
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| End bp | 4016913 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056381 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_662910 |
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| Protein GI | 109899655 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA TGATGCATCC GGATGTGGAT CCACAAGAAA CGCAAGAATG GTTAGATGCC
TTAGACGCAG TATTAGAAGA AGAAGGCATT GACCGTGCGC ATTATTTGCT AGAAAGCTTA
GTAGAAAAAG CCCGTCGCAA TGGTGCGTAT TTGCCTTATG ATGCGACCAC AGCATATATC
AATACGATCC CTGCAGGCCA AGAGCCTACC ATGCCAGGTG ACCAAACCAT TGAAGCCAAC
ATCCGCAGAG CCATTCGCTG GAACGCGATG ATGATGGTGC TTCGCGGCTC TAAGAAAGAC
TTAGAGCTAG GCGGCCATAT TTCAAGTTTT GCCTCTTCTG CCATGTTGTA CGATGTAGGC
TTTAACCACT TTTTCCGCGC ACCTAACGAG AAAGATGGCG GTGATTACTT GTTCGTACAA
GGTCACGTGT CACCTGGAAT ATACTCACGT GCATTTATTG AAGGGCGTCT AAGCGAAGAC
CAACTTGACG GCTTCCGTCA GGAAGTAGAC GGCAAAGGTG TTTCATCTTA TCCGCACCCT
AAATTAATGC CTGATTTCTG GCAGTTCCCA ACTGTATCTA TGGGCTTAGG CCCGATGCAG
GCGATTTACT TGGCGCGCTT CTTAAAATAC CTGACCAGCC GAGGCCTGAA AGACTGTTCA
GATCAACGCG TATGGTGCTT TATGGGTGAC GGTGAAGTCG ATGAGCCAGA AAGCTTGGGG
GCTATTGGTC TTGCATCACG CGAAGGCCTA GATAACCTAA CATTTGTCAT TAACTGTAAC
CTACAGCGCC TAGATGGCCC GGTACGTGGT AATGGTAAGA TTATCCAGGA ACTAGAAGGC
ACGTTCCGCG GCGCAGGCTG GGAAGTATTG AAAGTTATTT GGGGTCGTTA CTGGGATCCA
CTATTGGCCC GCGACTCATC AGGCAAATTG CTTGATGTGA TGAACGAAAC GGTTGATGGT
GAATACCAAA ACTACAAAGC GAAAGGCGGT GCTTACACAC GTGAGAACTT CTTTGGCAAA
TACCCTGAGC TAAAAGAAAT GGTGTCAAAT ATGTCAGACG ATGACATTTG GCGCTTGAAC
CGTGGCGGTC ACGATCCGGT TAAAGTCTAC GCTGCGTACA AGCGCGCAAC TGAAACCAAA
GGTCGTCCAC AGGTTATCCT AGCCAAAACC GTCAAAGGTT ACGGCATGGG CTCAGCAGGT
GAAGGTAAAA ATATCGCTCA CAACGTGAAG AAAATGGACG TGGATTCGGT ACGTGAATAC
CGTGACCGTT TTAATATTCC TGTTGCAGAC GAAGATATTG CAAACTTGCC GTATTTCAAA
TTTGCTGAAG ACAGCGAGGA AATGAAATAC ATGCGTGCCC GCCGTGAGTC GCTACATGGT
TATATGCCAG TACGTCTTGC AAAAAGCACT GAAGACTTAC CTGCTCCTCC TCTTAAAGCG
TTTGAAGCGA TTACTAAAGG ATCGGGTGAT CGTGAAATCT CGACCACTAT GGCCTTCGTT
CGTGTACTCA CCGTTATGTT GAAAGACAAA AAAGTCGGTT CTCGCGTCGT GCCCATCATT
CCTGATGAAG CTCGTACGTT TGGTATGGAA GGCTTATTCC GTCAAGTTGG TATCTATTCC
AATGGCGGTC AAAAGTACGT CCCTCAAGAT AAAGATCAAG TGGCTTACTA TCGTGAAGAC
GAAAAGGGCC AAGTACTGCA AGAAGGTATT AACGAGCTAG GCGCAATGGC CTCGTTTGTT
GCGGCTGGTA CGTCATATTC GACCAACGAT TTGCCTATGA TCCCTGTTTA TATTTACTAC
TCAATGTTCG GTTTCCAACG TGTTGGTGAC ATGGCGTGGG CAGCGGGTGA CAGTCAAACA
CGCGGTTTCT TAGTCGGCGG TACAGCGGGT AGAACAACCC TCAACGGCGA AGGTTTACAG
CACCAAGATG GTCACAGCCA CATTCAAGCT GGCTTAATTC CTAACTGTGT GTCTTATGAC
CCAACCTATG GTTACGAAAT TGCCGTTATC GTTCAAGACG GTATGCGCCG GATGTTTGAA
GAGCAAGAGA ACGTGTTCTA TTACCTGACC GTAATGAATG AAAACTACGT TCAACCAGCT
ATGCCTGACA ACGTTAGCGA AGGTATCGTC AAAGGTATTT ATAAACTTGA GCATCAAGGT
AACGCCAGCA ACAAGACCAA GGTGAAACTG CTTGGCTCTG GCACCATCTT AGAGCAAGTG
CGTGAAGCCG CTAAGATTTT GCATGACAAG TACTCTGTTG CATCAGAAGT CTACAGCGTG
ACCTCATTCA ATGAGTTGGG TCGTGACGGC TTGGATTGCG AGCACTTTAA CTTGTTGAAT
CCTGAAAAAG AGCAACGCGT TCCTTACATC ACGACAGTGT TAAACGACGG TTTTGATGGC
CCTACTATCG CAGCAACGGA TTACATCAAA ACTTATGTAG ACCAAGTACG TGCGTTTGTT
CCAGGTCAAT ACAAAGTGCT AGGCACAGAC GGTTTCGGCC GCTCAGATAG CCGCGCTAAC
TTGCGTCATC ATTTTGAAGT AGATGCTAAA TTCGTGGTCA TTGCTGCCCT TCGTGAATTA
GTTACAGCGG GTAACATCGA TAAGAAAGTA TTGGTAGATG CGATTGCAGA ATATGGCATT
GACCAAAATA AAATTAACCC GCTTTACGCA TAA
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| Protein sequence | MADMMHPDVD PQETQEWLDA LDAVLEEEGI DRAHYLLESL VEKARRNGAY LPYDATTAYI
NTIPAGQEPT MPGDQTIEAN IRRAIRWNAM MMVLRGSKKD LELGGHISSF ASSAMLYDVG
FNHFFRAPNE KDGGDYLFVQ GHVSPGIYSR AFIEGRLSED QLDGFRQEVD GKGVSSYPHP
KLMPDFWQFP TVSMGLGPMQ AIYLARFLKY LTSRGLKDCS DQRVWCFMGD GEVDEPESLG
AIGLASREGL DNLTFVINCN LQRLDGPVRG NGKIIQELEG TFRGAGWEVL KVIWGRYWDP
LLARDSSGKL LDVMNETVDG EYQNYKAKGG AYTRENFFGK YPELKEMVSN MSDDDIWRLN
RGGHDPVKVY AAYKRATETK GRPQVILAKT VKGYGMGSAG EGKNIAHNVK KMDVDSVREY
RDRFNIPVAD EDIANLPYFK FAEDSEEMKY MRARRESLHG YMPVRLAKST EDLPAPPLKA
FEAITKGSGD REISTTMAFV RVLTVMLKDK KVGSRVVPII PDEARTFGME GLFRQVGIYS
NGGQKYVPQD KDQVAYYRED EKGQVLQEGI NELGAMASFV AAGTSYSTND LPMIPVYIYY
SMFGFQRVGD MAWAAGDSQT RGFLVGGTAG RTTLNGEGLQ HQDGHSHIQA GLIPNCVSYD
PTYGYEIAVI VQDGMRRMFE EQENVFYYLT VMNENYVQPA MPDNVSEGIV KGIYKLEHQG
NASNKTKVKL LGSGTILEQV REAAKILHDK YSVASEVYSV TSFNELGRDG LDCEHFNLLN
PEKEQRVPYI TTVLNDGFDG PTIAATDYIK TYVDQVRAFV PGQYKVLGTD GFGRSDSRAN
LRHHFEVDAK FVVIAALREL VTAGNIDKKV LVDAIAEYGI DQNKINPLYA
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