Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3318 |
Symbol | |
ID | 4175095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3980797 |
End bp | 3981882 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056349 |
Product | phosphate binding protein, putative |
Protein accession | YP_662878 |
Protein GI | 109899623 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAA GTACTTTATC GATAATTTGT GCATGTGTGT GGACGCTAAT CAGCGCTCCA GCAAACGCTA TGCGCGACTA TATCGATGTT GTCGGCTCTT CAACTGTGTA TGCCTTCTCC ACGGTCGTGG CTGAACGTTT CGGCAAAACC TCACCGTTTC ATACACCCAA AATTGAATCG ACTGGCTCTG GTGGAGGGTT GAAATTATTC TGCCAAGGTG TGGGAATGAA GTTTCCTGAT ATTGCCAATT CATCCCGGCG GATCAAACCA TCAGAAATTG ACCTATGCCA GCGAAACGGT GTTCACGAGG TGATTGAAAT CTTGATCGGC TTTGATGGGA TCGTGCTTGC GCAAAGTAAA TTGGCTGAAA GTATCCCGCT AACACGCCGC GAACTCTACC TAGCATTGGC TAAAAGCGTG CCAAATCCAG ATGGTAGTGC AACCACCATC GATAATCCGT TCATAACGTG GCAAGACATC AACCCTAGAT TGCCGAACAT CGAAATCGAA GTGTTTGGTC CTCCCTCGAC TTCAGGTACA AGAGACGCTT TTTCTGAATT GGTACTCGAT TATGGTTGTC ATACCTTTGC TTGGTTAGCT CAGATGAGTG AGCCACAAAG CCAGGCACAG GCAACGTCAA AAGAAGCCAG AATCCGAAAA AGCCAGCAAA GACGCTTATG CCGGATGTTA CGGGAAGACG GCGCTTACAT TGATGCGGGG GAGAATGATA ATCTGGTTGT GCAAAAATTA AATGCCAATC CAAATGCGCT GGGTTTATTG GGCTTCAGCT TTCTTGATCA GAATAGAGAC CGCATTAAAA GCGCTAAAAT CGATGGATTT CTTCCGAGCT TTAGCTCTAT TGCCAATGGT GATTACCCTA TTTCAAGGCC ACTCTACTTT TATGTTAAAA AAGCACATAT TGGCATGATC CCAGGAATAG AGGCGTTTAT ACGCGAATTT ATCAGTGATA ATGCGTCCGG CGAAAGTGGC TATTTGCCGC GCAAGGGGAT GATCCCACTG ACCAAATCAG AACGCCAAGC CATCGAATAT CGAATCAACG CCTTGCACCC AACTATGCAT CAATAG
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Protein sequence | MKPSTLSIIC ACVWTLISAP ANAMRDYIDV VGSSTVYAFS TVVAERFGKT SPFHTPKIES TGSGGGLKLF CQGVGMKFPD IANSSRRIKP SEIDLCQRNG VHEVIEILIG FDGIVLAQSK LAESIPLTRR ELYLALAKSV PNPDGSATTI DNPFITWQDI NPRLPNIEIE VFGPPSTSGT RDAFSELVLD YGCHTFAWLA QMSEPQSQAQ ATSKEARIRK SQQRRLCRML REDGAYIDAG ENDNLVVQKL NANPNALGLL GFSFLDQNRD RIKSAKIDGF LPSFSSIANG DYPISRPLYF YVKKAHIGMI PGIEAFIREF ISDNASGESG YLPRKGMIPL TKSERQAIEY RINALHPTMH Q
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