| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3314 |
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| Symbol | |
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| ID | 4175091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3976456 |
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| End bp | 3977157 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056345 |
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| Product | phosphate uptake regulator, PhoU |
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| Protein accession | YP_662874 |
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| Protein GI | 109899619 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00113393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACGCC ATATTTCTCA GCGCTTTGAC TCTGATTTAG AAGCACTGAA AAGCCAAGTC
CTAGAAATGG GCGGCATAGT TGAGCAACAG ATTATCGATT CAGTTAAAGC CATAGAATCT
GTTAATAGGC CGCTAGCCGA ACACGTTCTG GAAGTGGAAG ACGATGTCGA TCGCCGTGAG
GTACTACTCG ATGAGAATTG CACCATGATC TTAGCGTGTC GCCAACCCGC AGCGTCAGAT
CTACGCATGG TGCTATCGGT CACCAAAATG ACCCGTGATT TAGAAAGAAT GGGAGACGAA
GCGCAAAAAA TCGCTCAAAT GGCCATTGCG TTAAGTGATG ATGGTGCAGC GCCAGGTGGT
TACGAAGAAA TTCGTCACAT GGGCGCATTA GTACAAAAAA TGGTGAATTC AGTGCTGGAT
GCGTTTGCTC GTTTTGATGC GGACAAAGCC TTAGATGTCG CTCGGGCCGA TACCCAAGTA
GACAGAGAAT ATAAATCCGC TATGCGTGAA ATTGTCACCT ATATGATGGA AGACCCACGC
TCGATTGGTC GCGTTATGAA TATTTTATGG GCGCTTCGCT CAATTGAGCG AATTGGCGAT
CATGCGCGTA ATATCGCTGA ACACATTATA TATCTGGTCA AAGGGTATGA CGTGCGTCAC
ACCAGTGTGC ATGAAATAGA AAAGAGACTA AACAAGTCTT AA
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| Protein sequence | MERHISQRFD SDLEALKSQV LEMGGIVEQQ IIDSVKAIES VNRPLAEHVL EVEDDVDRRE
VLLDENCTMI LACRQPAASD LRMVLSVTKM TRDLERMGDE AQKIAQMAIA LSDDGAAPGG
YEEIRHMGAL VQKMVNSVLD AFARFDADKA LDVARADTQV DREYKSAMRE IVTYMMEDPR
SIGRVMNILW ALRSIERIGD HARNIAEHII YLVKGYDVRH TSVHEIEKRL NKS
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