| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3298 |
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| Symbol | glpT |
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| ID | 4175075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3958617 |
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| End bp | 3959990 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056329 |
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| Product | sn-glycerol-3-phosphate transporter |
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| Protein accession | YP_662858 |
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| Protein GI | 109899603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGGTA TTTTTAAACC TGCTTCACAC CAACCTCGAC TCCCCAAAGA AGAAATAGAC
AAAGAATACA AAGCCCTGCG TTGGCAAGTG TTTATCGGTA TTTTTGTGGG CTACGCTGGT
TATTATTTAG TGCGCAAAAA CTTTTCTTTG GCAATGCCTT TTCTGATTGA AGAACAAGGT
TTTACCAAGG GCCAGTTGGG GATTGCATTA TCGGCGGTCT CTATTGCTTA TGGCCTGAGC
AAATTTTTAA TGGGCAGTGT GTCTGACCGC AGTAACCCCC GTTATTTTTT GATGACAGGA
TTACTAGTAT CCTCCGGCGT AATGTTTCTA TTTGGTTTCG CCGACTGGGC TACCCAAAGT
GTTGCTAGTA TCTTTGTGTT GCTGTTTATC AATGGTTGGG CACAAGGCAT GGGATGGCCA
GCATGTGGGC GGACCATGGT TCACTGGTAT TCAGGAAATG AACGAGGCCG TACGGTCTCG
TTTTGGAATA TTGCGCACAA TGTTGGCGGT GGCTTGATTG GTCCAATATT TATTTTAGGT
ATGGCGTGGT TCAATGACTG GCACAGTGCT TTTTATATGC CAGCTGCTGC AGCAAGCTTA
ATTGCCGTGT TTATCTATTT TGTAATGCGC GATACACCCC AGTCATGTGG TTTGCCGCCA
ATAGAAGAGT ATCGAAACGA TTACCCTGCT CAGTATTCTC AAAGCCATGA AGAAGAACTA
ACGGCAAAGC AAATATTTAT GCAGTTTGTA CTGAATAACA AATTGTTGTG GTTCATCGCT
GTGGCGAATG CGTTTGTCTA TTTAATACGT TACGGCGTGC TTGATTGGGC GCCTACCTAC
TTGTATGAAG TAAAAGACTT TTCATTTGAT AAAAGCTCAT GGGCTTACTT TCTTTACGAG
TGGGCAGGTA TTCCCGGCAC CCTACTATGT GGCTGGATAA GCGACCGATG GTTTAAAGGT
CGACGAGCAC CTGCGGCCAT ATTGTATATG TTATTGGTAT TGGTGGCAGT TGTGGTTTAC
TGGTTGAACC CAGCAGGTAA TCCGACCATC GATATCGCTG CTCTCATGGC AATTGGCTTC
TTGATTTATG GACCTGTCAT GCTAATCGGT TTATTCGCTC TTGAGCTGGT ACCTAAAAAG
GCTGCTGGCA CTGCCGCTGG CTTAACCGGG TTATTTGGCT ATTTAGGTGG AGCAGTTGTA
GCCAATATTG CGCTTGGCTA TACGGTTGAC CATTTCGGCT GGGACGGTGG CTTTGTATTA
TTGGTTGGCG GTTGCATAGG CGCTATTTTA CTTATCGCGT TAACCTTAAA ACACGAAGTC
GCACATGAAA GTCATCAGCG GGAAGAAGGC GCTCAACTCC AAGAAAGTCA ATAG
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| Protein sequence | MFGIFKPASH QPRLPKEEID KEYKALRWQV FIGIFVGYAG YYLVRKNFSL AMPFLIEEQG
FTKGQLGIAL SAVSIAYGLS KFLMGSVSDR SNPRYFLMTG LLVSSGVMFL FGFADWATQS
VASIFVLLFI NGWAQGMGWP ACGRTMVHWY SGNERGRTVS FWNIAHNVGG GLIGPIFILG
MAWFNDWHSA FYMPAAAASL IAVFIYFVMR DTPQSCGLPP IEEYRNDYPA QYSQSHEEEL
TAKQIFMQFV LNNKLLWFIA VANAFVYLIR YGVLDWAPTY LYEVKDFSFD KSSWAYFLYE
WAGIPGTLLC GWISDRWFKG RRAPAAILYM LLVLVAVVVY WLNPAGNPTI DIAALMAIGF
LIYGPVMLIG LFALELVPKK AAGTAAGLTG LFGYLGGAVV ANIALGYTVD HFGWDGGFVL
LVGGCIGAIL LIALTLKHEV AHESHQREEG AQLQESQ
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